RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ATXN7O15265 892 aaPredicted RBP16.75■□□□□ 0.27
UFD1-209ENST00000489406 TSPAN1O60635 241 aa16.75■□□□□ 0.27
UFD1-209ENST00000489406 ENGP17813 658 aa16.75■□□□□ 0.27
UFD1-209ENST00000489406 DHPSP49366 369 aaPredicted RBP16.75■□□□□ 0.27
UFD1-209ENST00000489406 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
UFD1-209ENST00000489406 NFXL1Q6ZNB6 911 aa16.75■□□□□ 0.27
UFD1-209ENST00000489406 PNPLA1Q8N8W4 532 aa16.75■□□□□ 0.27
UFD1-209ENST00000489406 NUSAP1Q9BXS6 441 aaKnown RBP16.75■□□□□ 0.27
UFD1-209ENST00000489406 UNC45AQ9H3U1 944 aa16.75■□□□□ 0.27
UFD1-209ENST00000489406 EVLQ9UI08 416 aaPredicted RBP16.75■□□□□ 0.27
UFD1-209ENST00000489406 USP9XQ93008 2570 aaPredicted RBP16.75■□□□□ 0.27
UFD1-209ENST00000489406 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 E7EWF7 191 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 RNF40O75150 1001 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 FGFR3P22607 806 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 SFNP31947 248 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 JAK3P52333 1124 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 TNK2Q07912 1038 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 IQCEQ6IPM2 695 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 FSTL4Q6MZW2 842 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 PPP1R18Q6NYC8 613 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 TEX2Q8IWB9 1127 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 ZNF461Q8TAF7 563 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 CCDC51Q96ER9 411 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 LRRC3BQ96PB8 259 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 JPH2Q9BR39 696 aaPredicted RBP16.74■□□□□ 0.27
UFD1-209ENST00000489406 CYP4F11Q9HBI6 524 aa16.74■□□□□ 0.27
UFD1-209ENST00000489406 MBD1Q9UIS9 605 aaPredicted RBP16.74■□□□□ 0.27
UFD1-209ENST00000489406 THADAQ6YHU6 1953 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 PLXNB3Q9ULL4 1909 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 SEC24AO95486 1093 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 AXLP30530 894 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 DGKEP52429 567 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 ROR1Q01973 937 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
UFD1-209ENST00000489406 ARHGAP29Q52LW3 1261 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 PLA2G4FQ68DD2 849 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 ELMOD1Q8N336 334 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 HDDC3Q8N4P3 179 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 ADAMTS14Q8WXS8 1223 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 ZNF512Q96ME7 567 aaPredicted RBP16.73■□□□□ 0.27
UFD1-209ENST00000489406 IL25Q9H293 177 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 INSL5Q9Y5Q6 135 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 BACE2Q9Y5Z0 518 aa16.73■□□□□ 0.27
UFD1-209ENST00000489406 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
UFD1-209ENST00000489406 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 GAS7O60861 476 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 APBB3O95704 486 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 BCKDHBP21953 392 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
UFD1-209ENST00000489406 ARPP19P56211 112 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 GRSF1Q12849 480 aaKnown RBP eCLIP16.72■□□□□ 0.27
UFD1-209ENST00000489406 TMEM196Q5HYL7 178 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 ANO5Q75V66 913 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 CDR2LQ86X02 465 aaPredicted RBP16.72■□□□□ 0.27
UFD1-209ENST00000489406 PSPC1Q8WXF1 523 aaKnown RBP16.72■□□□□ 0.27
UFD1-209ENST00000489406 GJA10Q969M2 543 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 LENG9Q96B70 501 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 GPR88Q9GZN0 384 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 BMP2KQ9NSY1 1161 aaPredicted RBP16.72■□□□□ 0.27
UFD1-209ENST00000489406 CEP72Q9P209 647 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 EBF1Q9UH73 591 aa16.72■□□□□ 0.27
UFD1-209ENST00000489406 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
UFD1-209ENST00000489406 PIEZO2Q9H5I5 2752 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 MSH4O15457 936 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 ABLIM3O94929 683 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 NPTXRO95502 500 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
UFD1-209ENST00000489406 USP39Q53GS9 565 aaKnown RBP16.71■□□□□ 0.27
UFD1-209ENST00000489406 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 C11orf74Q86VG3 221 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
UFD1-209ENST00000489406 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
UFD1-209ENST00000489406 TCEAL8Q8IYN2 117 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 SHKBP1Q8TBC3 707 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 DDX27Q96GQ7 796 aaKnown RBP16.71■□□□□ 0.27
UFD1-209ENST00000489406 TEKT3Q9BXF9 490 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 TPSD1Q9BZJ3 242 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 CLMPQ9H6B4 373 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 ASAH2Q9NR71 780 aa16.71■□□□□ 0.27
UFD1-209ENST00000489406 A0A087WV48 116 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 CCER2I3L3R5 266 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 I3L4J1 428 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 HIP1O00291 1037 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 ADAMTS3O15072 1205 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 EGFP01133 1207 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 PRKCBP05771 671 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 ATF2P15336 505 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 ATXN3P54252 364 aaPredicted RBP16.7■□□□□ 0.26
UFD1-209ENST00000489406 NPEPPSP55786 919 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 TRIP6Q15654 476 aaKnown RBP16.7■□□□□ 0.26
UFD1-209ENST00000489406 ITPRIPL2Q3MIP1 535 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 LRCH2Q5VUJ6 765 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 ANKS3Q6ZW76 656 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms