RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 PTPN21Q16825 1174 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 KNOP1Q1ED39 458 aaKnown RBP9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 PLA2G4FQ68DD2 849 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 TTI2Q6NXR4 508 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 KSR1Q8IVT5 923 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 DAW1Q8N136 415 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 VPS52Q8N1B4 723 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 MYCT1Q8N699 235 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 URGCPQ8TCY9 931 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 PSPC1Q8WXF1 523 aaKnown RBP9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 LPPQ93052 612 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 IGSF21Q96ID5 467 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 IFT74Q96LB3 600 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 CEP63Q96MT8 703 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 APOL5Q9BWW9 433 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 STRA6Q9BX79 667 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 ZBP1Q9H171 429 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 IRF2BPLQ9H1B7 796 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 TMEM206Q9H813 350 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 SLC39A2Q9NP94 309 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 AGPAT5Q9NUQ2 364 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 TBC1D13Q9NVG8 400 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 KANSL3Q9P2N6 904 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 TRAF3IP3Q9Y228 551 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 GDAQ9Y2T3 454 aa9.36□□□□□ -0.91
ERGIC3-218ENST00000489071 CNTNAP2Q9UHC6 1331 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 TDRD15B5MCY1 1934 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 NPHP3-ACAD11A0A0J9YXS1 232 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 CALUO43852 315 aaPredicted RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 USO1O60763 962 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 SRGAP2CP0DJJ0 459 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 RPL13P26373 211 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 ARL2P36404 184 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 NCKAP1LP55160 1127 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 NPEPPSP55786 919 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 GTF2BQ00403 316 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 PPP2R3AQ06190 1150 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 DMP1Q13316 513 aaPredicted RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 PCBP1Q15365 356 aaKnown RBP eCLIP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 ZCWPW2Q504Y3 356 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 ATAT1Q5SQI0 421 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 KLHL10Q6JEL2 608 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 MAMSTRQ6ZN01 415 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 MRPL10Q7Z7H8 261 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 SFR1Q86XK3 245 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 ZC3H3Q8IXZ2 948 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 UBALD2Q8IYN6 164 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 KMT2EQ8IZD2 1858 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 SCFD1Q8WVM8 642 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 PRPF31Q8WWY3 499 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 FAM193BQ96PV7 902 aaPredicted RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 KCTD10Q9H3F6 313 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 ZHX3Q9H4I2 956 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 UBN1Q9NPG3 1134 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 LIMA1Q9UHB6 759 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 EXOC7Q9UPT5 735 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 CTNND2Q9UQB3 1225 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 PCDHB2Q9Y5E7 798 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 MTCL1Q9Y4B5 1905 aaKnown RBP9.35□□□□□ -0.91
ERGIC3-218ENST00000489071 CACNA1HO95180 2353 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 A0A087WWV3 80 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 GOLGA6L6A8MZA4 724 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ERLIN2O94905 339 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 GCNT3O95395 438 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ADCY5O95622 1261 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ALDH2P05091 517 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 TPM2P07951 284 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 AXLP30530 894 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 DEKP35659 375 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 NAMPTP43490 491 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 EFNA5P52803 228 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 MARSP56192 900 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ENPEPQ07075 957 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 NCBP1Q09161 790 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 LAMTOR4Q0VGL1 99 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 EMC2Q15006 297 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 FILIP1LQ4L180 1135 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 HS1BP3Q53T59 392 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 RARS2Q5T160 578 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ANKRD40Q6AI12 368 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 FILIP1Q7Z7B0 1213 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 SLC9A9Q8IVB4 645 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 C12orf56Q8IXR9 622 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 SMYD4Q8IYR2 804 aaPredicted RBP9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 CSGALNACT2Q8N6G5 542 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 TMEM143Q96AN5 459 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ASIC4Q96FT7 647 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 ACCSQ96QU6 501 aa9.34□□□□□ -0.91
ERGIC3-218ENST00000489071 MED15Q96RN5 788 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms