RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 EURLQ9NYK6 297 aa20.76■□□□□ 0.91
HMG20B-213ENST00000488973 CETPP11597 493 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 MAPK4P31152 587 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 STAT2P52630 851 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 CENPCQ03188 943 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 LLGL1Q15334 1064 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 SRRM1Q8IYB3 904 aaKnown RBP20.75■□□□□ 0.91
HMG20B-213ENST00000488973 ANKLE1Q8NAG6 615 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 ATG4AQ8WYN0 398 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 DDX1Q92499 740 aaKnown RBP20.75■□□□□ 0.91
HMG20B-213ENST00000488973 TRIM33Q9UPN9 1127 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 GRIN3BO60391 1043 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 SKAP2O75563 359 aaPredicted RBP20.75■□□□□ 0.91
HMG20B-213ENST00000488973 MMP10P09238 476 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 PLS3P13797 630 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 ALDH1B1P30837 517 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 SLC1A1P43005 524 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 UBXN2AP68543 259 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 LMNB2Q03252 620 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 PARP6Q2NL67 630 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 HELQQ8TDG4 1101 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 RIT2Q99578 217 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 ST6GALNAC4Q9H4F1 302 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 DNAJC17Q9NVM6 304 aaKnown RBP20.75■□□□□ 0.91
HMG20B-213ENST00000488973 TBK1Q9UHD2 729 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 ANAPC7Q9UJX3 599 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 COQ4Q9Y3A0 265 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 NEU2Q9Y3R4 380 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 RGPD3A6NKT7 1758 aaPredicted RBP20.75■□□□□ 0.91
HMG20B-213ENST00000488973 RGPD4Q7Z3J3 1758 aa20.75■□□□□ 0.91
HMG20B-213ENST00000488973 IPO5O00410 1097 aaKnown RBP20.74■□□□□ 0.91
HMG20B-213ENST00000488973 LIN7AO14910 233 aaPredicted RBP20.74■□□□□ 0.91
HMG20B-213ENST00000488973 MAFGO15525 162 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 GTF2BQ00403 316 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 TRIP13Q15645 432 aaPredicted RBP20.74■□□□□ 0.91
HMG20B-213ENST00000488973 MAEAQ7L5Y9 396 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 ZSWIM2Q8NEG5 633 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 SEMA4DQ92854 862 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 FAM81BQ96LP2 452 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.74■□□□□ 0.91
HMG20B-213ENST00000488973 STARD13Q9Y3M8 1113 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 MAGEB2O15479 319 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 FOXN2P32314 431 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 GPC3P51654 580 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 CLEC16AQ2KHT3 1053 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 RBM26Q5T8P6 1007 aaKnown RBP20.74■□□□□ 0.91
HMG20B-213ENST00000488973 KRT39Q6A163 491 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 CEP128Q6ZU80 1094 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 ANKRD31Q8N7Z5 1873 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 SPDYE1Q8NFV5 336 aaPredicted RBP20.74■□□□□ 0.91
HMG20B-213ENST00000488973 IWS1Q96ST2 819 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 ETNK1Q9HBU6 452 aa20.74■□□□□ 0.91
HMG20B-213ENST00000488973 FAM47DPA6NHR8 397 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 GH2P01242 217 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 ADRB2P07550 413 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 ABHD2P08910 425 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 ANKRD20A2Q5SQ80 823 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 TMEM63BQ5T3F8 832 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 ANKRD20A1Q5TYW2 823 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 ANKRD20A3Q5VUR7 823 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 CCDC89Q8N998 374 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 AVENQ9NQS1 362 aaPredicted RBP20.73■□□□□ 0.91
HMG20B-213ENST00000488973 A0A1W2PRG0 241 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 G3V3G9 751 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 RTN3O95197 1032 aaPredicted RBP20.73■□□□□ 0.91
HMG20B-213ENST00000488973 PTP4A2Q12974 167 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 NR1H3Q13133 447 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 HAUS6Q7Z4H7 955 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 NT5C1BQ96P26 610 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 HERPUD2Q9BSE4 406 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 FOXP3Q9BZS1 431 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 LRMDAQ9H2I8 198 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.73■□□□□ 0.919e-7■■■■■ 78
HMG20B-213ENST00000488973 PCDHAC2Q9Y5I4 1007 aa20.73■□□□□ 0.91
HMG20B-213ENST00000488973 TNS1Q9HBL0 1735 aaKnown RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 POLGP54098 1239 aaPredicted RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 YARSP54577 528 aaKnown RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 JAG1P78504 1218 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 SETDB1Q15047 1291 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 MAML1Q92585 1016 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 UBN1Q9NPG3 1134 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 RASA4BC9J798 803 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 RASA4O43374 803 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 P4HBP07237 508 aaKnown RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 PEX19P40855 299 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 WDR4P57081 412 aaKnown RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 KLF1Q13351 362 aaPredicted RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 CCNG2Q16589 344 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 SEPT14Q6ZU15 432 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 MIER3Q7Z3K6 550 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 UTP4Q969X6 686 aaKnown RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 DDX27Q96GQ7 796 aaKnown RBP20.72■□□□□ 0.91
HMG20B-213ENST00000488973 MASTLQ96GX5 879 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 TMEM8AQ9HCN3 771 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 ATRNL1Q5VV63 1379 aa20.72■□□□□ 0.91
HMG20B-213ENST00000488973 AHCYL1O43865 530 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 LUC7L3O95232 432 aaKnown RBP20.71■□□□□ 0.91
HMG20B-213ENST00000488973 ASMTLO95671 621 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms