RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 GGT7Q9UJ14 662 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 PTPRJQ12913 1337 aa8.15□□□□□ -1.1
BEST3-205ENST00000488961 FER1L6Q2WGJ9 1857 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 TARSL2A2RTX5 802 aaKnown RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 A6NNZ2 444 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 A8MUI8 341 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 PIK3CDO00329 1044 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 VWA5AO00534 786 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 TBX3O15119 743 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 P4HBP07237 508 aaKnown RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 FGFR4P22455 802 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 IGBP1P78318 339 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 SFSWAPQ12872 951 aaKnown RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 TNIP1Q15025 636 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 UAP1Q16222 522 aaPredicted RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 TUBB8Q3ZCM7 444 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 DALRD3Q5D0E6 543 aaKnown RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 ANKRD20A2Q5SQ80 823 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 ANKRD20A1Q5TYW2 823 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 ANKRD20A3Q5VUR7 823 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 CRELD2Q6UXH1 353 aaPredicted RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 MAIP1Q8WWC4 291 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 GLT8D2Q9H1C3 349 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 TUFT1Q9NNX1 390 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 KMT5AQ9NQR1 393 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 LARSQ9P2J5 1176 aaKnown RBP8.15□□□□□ -1.11
BEST3-205ENST00000488961 GGA2Q9UJY4 613 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 ALG6Q9Y672 507 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 XIRP2A4UGR9 3374 aa8.15□□□□□ -1.11
BEST3-205ENST00000488961 hCG_2014768A0A024R1R8 64 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 PI4K2BG5E9Z4 385 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 SRGAP2CP0DJJ0 459 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 TCF4P15884 667 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 COMTP21964 271 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 CTNNA1P35221 906 aaKnown RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 HSD17B3P37058 310 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 GJA8P48165 433 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 NLRP11P59045 1033 aaKnown RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 ATP13A4Q4VNC1 1196 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 IFT20Q8IY31 132 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 RTKN2Q8IZC4 609 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 LMO3Q8TAP4 145 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 MGARPQ8TDB4 240 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 C17orf50Q8WW18 174 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 COPS5Q92905 334 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 ZNF653Q96CK0 615 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 AGPAT1Q99943 283 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 ARPC5LQ9BPX5 153 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 HERPUD2Q9BSE4 406 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 SLC38A10Q9HBR0 1119 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 OLFML3Q9NRN5 406 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.14□□□□□ -1.11
BEST3-205ENST00000488961 AMFRQ9UKV5 643 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 BPTFQ12830 3046 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 PGRMC1O00264 195 aaKnown RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 CLDN3O15551 220 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 SPOPO43791 374 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 PYGMP11217 842 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 CHRNB2P17787 502 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 CA8P35219 290 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 NT5C2P49902 561 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 EPHB4P54760 987 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 SLMAPQ14BN4 828 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 LY6KQ17RY6 165 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 LACTB2Q53H82 288 aaPredicted RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 KAZNQ674X7 775 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 ANO7Q6IWH7 933 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 VPS36Q86VN1 386 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 CACNA2D3Q8IZS8 1091 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 XXYLT1Q8NBI6 393 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 SUPT20HQ8NEM7 779 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 CLMNQ96JQ2 1002 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 NAP1L4Q99733 375 aaKnown RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 ZWILCHQ9H900 591 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 SPATA7Q9P0W8 599 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 PHF24Q9UPV7 400 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 GINS2Q9Y248 185 aa8.14□□□□□ -1.11
BEST3-205ENST00000488961 RBBP6Q7Z6E9 1792 aaKnown RBP8.14□□□□□ -1.11
BEST3-205ENST00000488961 GAP43P17677 238 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ECHS1P30084 290 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 TNFSF9P41273 254 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 PRKCEQ02156 737 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ALS2CLQ60I27 953 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 TTC27Q6P3X3 843 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 GADL1Q6ZQY3 521 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 CCT6BQ92526 530 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 TCHPQ9BT92 498 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 STK33Q9BYT3 514 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 METTL14Q9HCE5 456 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 LUC7LQ9NQ29 371 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 PGAP2Q9UHJ9 254 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ASB3Q9Y575 518 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 STK24Q9Y6E0 443 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ZNF646O15015 1829 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms