RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 STARD7Q9NQZ5 370 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 CYP26B1Q9NR63 512 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 TNRC18O15417 2968 aaPredicted RBP19.65■□□□□ 0.74
COL16A1-215ENST00000488897 EMSYQ7Z589 1322 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 CDH23Q9H251 3354 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 VGLL3A8MV65 326 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 KBTBD13C9JR72 458 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 H0YGN5 161 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 KIAA0754O94854 1291 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 CTNNA1P35221 906 aaKnown RBP19.65■□□□□ 0.74
COL16A1-215ENST00000488897 LIG3P49916 1009 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 CLCN3P51790 818 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 ITGA7Q13683 1181 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 PLPPR4Q7Z2D5 763 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 CRISPLD2Q9H0B8 497 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 FAM114A2Q9NRY5 505 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 USP20Q9Y2K6 914 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 DAAM1Q9Y4D1 1078 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 NFS1Q9Y697 457 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 UBE4BO95155 1302 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 TMEM253P0C7T8 217 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 PTPROQ16827 1216 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 STXBP4Q6ZWJ1 553 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 C1orf186Q6ZWK4 172 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 DDX42Q86XP3 938 aaKnown RBP eCLIP19.64■□□□□ 0.74
COL16A1-215ENST00000488897 C7orf31Q8N865 590 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 ARRDC4Q8NCT1 418 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 ATP8B4Q8TF62 1192 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 SEC14L1Q92503 715 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 ABHD8Q96I13 439 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 NACC1Q96RE7 527 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 MTG1Q9BT17 334 aaPredicted RBP19.64■□□□□ 0.74
COL16A1-215ENST00000488897 FAM49AQ9H0Q0 323 aaPredicted RBP19.64■□□□□ 0.74
COL16A1-215ENST00000488897 PARVGQ9HBI0 331 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 SEL1LQ9UBV2 794 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 GINS2Q9Y248 185 aa19.64■□□□□ 0.74
COL16A1-215ENST00000488897 NCANO14594 1321 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 F8VZ95 297 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 FMO5P49326 533 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 GRIK4Q16099 956 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 UAP1Q16222 522 aaPredicted RBP19.64■□□□□ 0.73
COL16A1-215ENST00000488897 PPP2R5EQ16537 467 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 XKR3Q5GH77 459 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 NAA35Q5VZE5 725 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 LNX1Q8TBB1 728 aaPredicted RBP19.64■□□□□ 0.73
COL16A1-215ENST00000488897 RFFLQ8WZ73 363 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 GLT1D1Q96MS3 346 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 OSBPL7Q9BZF2 842 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 AMACRQ9UHK6 382 aa19.64■□□□□ 0.73
COL16A1-215ENST00000488897 UTP11Q9Y3A2 253 aaKnown RBP19.64■□□□□ 0.73
COL16A1-215ENST00000488897 CYP2C9P11712 490 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 NMT1P30419 496 aaKnown RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 MKRN4PQ13434 485 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 PADI6Q6TGC4 694 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 HS2ST1Q7LGA3 356 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 NLRP14Q86W24 1093 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 PCSK9Q8NBP7 692 aaKnown RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 CEP89Q96ST8 783 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 DNAJC12Q9UKB3 198 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 ZMYM2Q9UBW7 1377 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 ARHGEF35A5YM69 484 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 HAS3O00219 553 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 PQBP1O60828 265 aaKnown RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 ITGA4P13612 1032 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 DRAP1Q14919 205 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 YTHDF3Q7Z739 585 aaKnown RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 SLC35G2Q8TBE7 412 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 ZNF473Q8WTR7 871 aaKnown RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 CTNNBL1Q8WYA6 563 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-215ENST00000488897 KIFC3Q9BVG8 833 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 NEUROG2Q9H2A3 272 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 GGA2Q9UJY4 613 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 FRMD4BQ9Y2L6 1034 aa19.63■□□□□ 0.73
COL16A1-215ENST00000488897 KAT6AQ92794 2004 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 DNM1LO00429 736 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 MEFVO15553 781 aaPredicted RBP19.62■□□□□ 0.73
COL16A1-215ENST00000488897 MUTP22033 750 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 ZNF844Q08AG5 666 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 PPP2R5AQ15172 486 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 AGBL2Q5U5Z8 902 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 OTUD6BQ8N6M0 293 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 RDM1Q8NG50 284 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 CCT8L2Q96SF2 557 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 NAP1L3Q99457 506 aaPredicted RBP19.62■□□□□ 0.73
COL16A1-215ENST00000488897 CENPHQ9H3R5 247 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 XPNPEP1Q9NQW7 623 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 DAPK3O43293 454 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 FAM107AO95990 144 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 VTNP04004 478 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 CST5P28325 142 aaPredicted RBP19.62■□□□□ 0.73
COL16A1-215ENST00000488897 GLYCTKQ8IVS8 523 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 UBLCP1Q8WVY7 318 aaPredicted RBP19.62■□□□□ 0.73
COL16A1-215ENST00000488897 IKZF4Q9H2S9 585 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 NRBP2Q9NSY0 501 aa19.62■□□□□ 0.73
COL16A1-215ENST00000488897 BUB1BO60566 1050 aaPredicted RBP19.61■□□□□ 0.73
COL16A1-215ENST00000488897 HPDP32754 393 aaPredicted RBP19.61■□□□□ 0.73
COL16A1-215ENST00000488897 TARBP2Q15633 366 aaKnown RBP19.61■□□□□ 0.73
COL16A1-215ENST00000488897 CLUL1Q15846 466 aa19.61■□□□□ 0.73
COL16A1-215ENST00000488897 FAM102BQ5T8I3 360 aa19.61■□□□□ 0.73
COL16A1-215ENST00000488897 ZNF720Q7Z2F6 126 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms