RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NDUFA10O95299 355 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 MYBP10242 640 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 TYRP1P17643 537 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 ATF3P18847 181 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 LPOP22079 712 aaPredicted RBP4.22□□□□□ -1.73
CD46-215ENST00000488596 GZMKP49863 264 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 SLC16A1P53985 500 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 WNT3AP56704 352 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 FOXI1Q12951 378 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 BEAN1Q3B7T3 259 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 IFIT1BQ5T764 474 aaKnown RBP4.22□□□□□ -1.73
CD46-215ENST00000488596 EPM2AIP1Q7L775 607 aaPredicted RBP4.22□□□□□ -1.73
CD46-215ENST00000488596 SYT12Q8IV01 421 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 LCORLQ8N3X6 602 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 MAGEB6Q8N7X4 407 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 SUPT20HQ8NEM7 779 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 FBXO18Q8NFZ0 1043 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 STON2Q8WXE9 905 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 KAT5Q92993 513 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 RAB24Q969Q5 203 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 COX11Q9Y6N1 276 aa4.22□□□□□ -1.73
CD46-215ENST00000488596 RNASET2O00584 256 aaKnown RBP4.21□□□□□ -1.74
CD46-215ENST00000488596 ZNF185O15231 689 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 ADCY6O43306 1168 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 VCAM1P19320 739 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 AKAP5P24588 427 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 CD38P28907 300 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 PTH2RP49190 550 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 PER3P56645 1201 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 RNASE9P60153 205 aaKnown RBP4.21□□□□□ -1.74
CD46-215ENST00000488596 NHLH2Q02577 135 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 DUSP2Q05923 314 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 GTF2H3Q13889 308 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 C19orf54Q5BKX5 351 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 ANKS6Q68DC2 871 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 NXNQ6DKJ4 435 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 USP45Q70EL2 814 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 RD3Q7Z3Z2 195 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 RHOT1Q8IXI2 618 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 GRAMD1CQ8IYS0 662 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 REPS2Q8NFH8 660 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 CCHCR1Q8TD31 782 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 LINC00476Q8WZB0 136 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 SLC12A5Q9H2X9 1139 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 LDAHQ9H6V9 325 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 SPON1Q9HCB6 807 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 SAP30BPQ9UHR5 308 aaKnown RBP4.21□□□□□ -1.74
CD46-215ENST00000488596 SIK3Q9Y2K2 1263 aa4.21□□□□□ -1.74
CD46-215ENST00000488596 ZMYM3Q14202 1370 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 GAGE12BA1L429 117 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 UNC119BA6NIH7 251 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 WNT10BO00744 389 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 PHF2O75151 1096 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 OFD1O75665 1012 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 ITGB6P18564 788 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 PLA2G5P39877 138 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 WASP42768 502 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 SLC6A9P48067 706 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 SEC24CP53992 1094 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 MEF2AQ02078 507 aaPredicted RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 PDCD4Q53EL6 469 aaKnown RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 PRR16Q569H4 304 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 HSP90AB2PQ58FF8 381 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 ATAT1Q5SQI0 421 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 CXorf57Q6NSI4 855 aaKnown RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 FBXO42Q6P3S6 717 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 FAM180AQ6UWF9 173 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 B3GNT9Q6UX72 402 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 NOL8Q76FK4 1167 aaKnown RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 BHLHA9Q7RTU4 235 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 GLCCI1Q86VQ1 547 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 PQLC1Q8N2U9 271 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 PRR18Q8N4B5 295 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 CPEB3Q8NE35 698 aaKnown RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD46-215ENST00000488596 SLC35G2Q8TBE7 412 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 HPS3Q969F9 1004 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 HDAC10Q969S8 669 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 PAWRQ96IZ0 340 aaKnown RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 AIFM3Q96NN9 605 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 NUP88Q99567 741 aaPredicted RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 C7orf25Q9BPX7 421 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 GPRC5DQ9NZD1 345 aa4.2□□□□□ -1.74
CD46-215ENST00000488596 COL11A2P13942 1736 aaPredicted RBP4.2□□□□□ -1.74
CD46-215ENST00000488596 PIPSLA2A3N6 862 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 VSTM5A8MXK1 200 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 PRR5-ARHGAP8B1AHC4 643 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 CTNND1O60716 968 aaKnown RBP4.19□□□□□ -1.74
CD46-215ENST00000488596 ITGA10O75578 1167 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 HSPA6P17066 643 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 ECHS1P30084 290 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 PTPN7P35236 360 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 BMPR1AP36894 532 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 SREBF1P36956 1147 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 AVPR1BP47901 424 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 DSC2Q02487 901 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 MGAT2Q10469 447 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 MST1LQ2TV78 715 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 MINDY4Q4G0A6 757 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms