RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 AMHR2Q16671 573 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 TMEM132AQ24JP5 1023 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 ZACNQ401N2 412 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 ZBTB33Q86T24 672 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 OSBPL7Q9BZF2 842 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 TSGA10Q9BZW7 698 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 PDE11AQ9HCR9 933 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 LUC7LQ9NQ29 371 aaKnown RBP13.72□□□□□ -0.21
NELFE-209ENST00000488426 LZTFL1Q9NQ48 299 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 RAB20Q9NX57 234 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 MYO1AQ9UBC5 1043 aa13.72□□□□□ -0.21
NELFE-209ENST00000488426 CPSF3Q9UKF6 684 aaKnown RBP13.72□□□□□ -0.21
NELFE-209ENST00000488426 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
NELFE-209ENST00000488426 B4GALT5O43286 388 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 KIF5CO60282 957 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 GFPT2O94808 682 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 MCF2P10911 925 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 MYOGP15173 224 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 TNNI1P19237 187 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 RABGGTBP53611 331 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 TERF1P54274 439 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 ARID5AQ03989 594 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 PTPN11Q06124 597 aaPredicted RBP13.71□□□□□ -0.21
NELFE-209ENST00000488426 PCBP1Q15365 356 aaKnown RBP eCLIP13.71□□□□□ -0.21
NELFE-209ENST00000488426 KYAT1Q16773 422 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 SYT10Q6XYQ8 523 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 TAS1R2Q8TE23 839 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 ZNF592Q92610 1267 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 NT5C1BQ96P26 610 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 CDX2Q99626 313 aaPredicted RBP13.71□□□□□ -0.21
NELFE-209ENST00000488426 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 CDT1Q9H211 546 aa13.71□□□□□ -0.21
NELFE-209ENST00000488426 C17orf102A2RUQ5 167 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ZNF263O14978 683 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 KRT86O43790 486 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 C4BPAP04003 597 aaKnown RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 DNAJB2P25686 324 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 GNG11P61952 73 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 PDE4CQ08493 712 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 SLC18A3Q16572 532 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 TRAF7Q6Q0C0 670 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 VPS36Q86VN1 386 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ARHGEF19Q8IW93 802 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 SEMA4DQ92854 862 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 JAKMIP2Q96AA8 810 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 GCOM2Q9BZD3 368 aaPredicted RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 ADAMTS10Q9H324 1103 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 UBE2TQ9NPD8 197 aaPredicted RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 NOD1Q9Y239 953 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ANK1P16157 1881 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ATP8B3O60423 1300 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 A0A0U1RQJ8 604 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ERLIN2O94905 339 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 MFAP3P55082 362 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 WNT7BP56706 349 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 PTK2Q05397 1052 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 TRIM71Q2Q1W2 868 aaKnown RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 C10orf76Q5T2E6 689 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 EEF1DP3Q658K8 133 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 ATRIPQ8WXE1 791 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 FAM49AQ9H0Q0 323 aaPredicted RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 PDZD7Q9H5P4 517 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 DNAI1Q9UI46 699 aa13.7□□□□□ -0.22
NELFE-209ENST00000488426 YBX2Q9Y2T7 364 aaKnown RBP13.7□□□□□ -0.22
NELFE-209ENST00000488426 XIRP2A4UGR9 3374 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 PTPRJQ12913 1337 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 TREHO43280 583 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 TSPAN1O60635 241 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 GPR32O75388 356 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 IL18RAPO95256 599 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 CKBP12277 381 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
NELFE-209ENST00000488426 TNFSF9P41273 254 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 GCNT1Q02742 428 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 GFPT1Q06210 699 aaPredicted RBP13.69□□□□□ -0.22
NELFE-209ENST00000488426 KIF5AQ12840 1032 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 ARHGAP44Q17R89 818 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 CCDC122Q5T0U0 273 aa13.69□□□□□ -0.22
NELFE-209ENST00000488426 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
NELFE-209ENST00000488426 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
NELFE-209ENST00000488426 NME8Q8N427 588 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms