RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PDRG1Q9NUG6 133 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 ZNF215Q9UL58 517 aaPredicted RBP6.7□□□□□ -1.34
CDHR3-213ENST00000488386 CYP46A1Q9Y6A2 500 aa6.7□□□□□ -1.34
CDHR3-213ENST00000488386 NID2Q14112 1375 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 IGLV3-22A0A075B6J6 115 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.69□□□□□ -1.34
CDHR3-213ENST00000488386 MEIS1O00470 390 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CHMP2AO43633 222 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 BAIAP3O94812 1187 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 LRIG2O94898 1065 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 SLITRK5O94991 958 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 HTR3BO95264 441 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 LARGE1O95461 756 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 INSRRP14616 1297 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 PLCG1P19174 1290 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 AKAP17AQ02040 695 aaKnown RBP6.69□□□□□ -1.34
CDHR3-213ENST00000488386 MGAT3Q09327 533 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 SCRN1Q12765 414 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 PRR16Q569H4 304 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 PLEKHG4Q58EX7 1191 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CCDC60Q8IWA6 550 aaPredicted RBP6.69□□□□□ -1.34
CDHR3-213ENST00000488386 REXO1Q8N1G1 1221 aaKnown RBP6.69□□□□□ -1.34
CDHR3-213ENST00000488386 NECAB1Q8N987 351 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 KCT2Q8NC54 265 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CRYGNQ8WXF5 182 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CDHR1Q96JP9 859 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 ZNF668Q96K58 619 aaPredicted RBP6.69□□□□□ -1.34
CDHR3-213ENST00000488386 SDF4Q9BRK5 362 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 C17orf80Q9BSJ5 609 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 NT5C1AQ9BXI3 368 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 ZMYND12Q9H0C1 365 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 C6orf50Q9HD87 102 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 ERAP1Q9NZ08 941 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CHD7Q9P2D1 2997 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 REV1Q9UBZ9 1251 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 TUBE1Q9UJT0 475 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 TPCN1Q9ULQ1 816 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 KCNJ14Q9UNX9 436 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CDY2AQ9Y6F7 541 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 WDR81Q562E7 1941 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 TCF20Q9UGU0 1960 aaKnown RBP6.69□□□□□ -1.34
CDHR3-213ENST00000488386 EMSYQ7Z589 1322 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 CHD9Q3L8U1 2897 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 REV3LO60673 3130 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 EVPLQ92817 2033 aa6.69□□□□□ -1.34
CDHR3-213ENST00000488386 VCANP13611 3396 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 SPTBN5Q9NRC6 3674 aaKnown RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 CCDC196A0A1B0GTZ2 297 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 LINC01553A4QN01 128 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 UPK3BL1B0FP48 263 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 UPK3BL2E5RIL1 263 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 hCG_1984214I3L0E3 225 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 LPXNO60711 386 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 GJB5O95377 273 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 TDP2O95551 362 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 EOMESO95936 686 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 CST3P01034 146 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 FOSP01100 380 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 TCF3P15923 654 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 IFNAR1P17181 557 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 SSTR4P31391 388 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 STAT5BP51692 787 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 RCAN1P53805 252 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 EVCP57679 992 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 NLRP5P59047 1200 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 TFF2Q03403 129 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 SSRP1Q08945 709 aaKnown RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 GRB10Q13322 594 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 LPIN1Q14693 890 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 TMEM266Q2M3C6 531 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 SWSAP1Q6NVH7 229 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 FAM214BQ7L5A3 538 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 MRPL41Q8IXM3 137 aaKnown RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 ZNF713Q8N859 430 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 FAM181AQ8N9Y4 354 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 GIMAP8Q8ND71 665 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 RIN3Q8TB24 985 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 PHOSPHO2Q8TCD6 241 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 LINC01599Q8WXQ3 324 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 MIPEPQ99797 713 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 SH2D3AQ9BRG2 576 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 ZNF577Q9BSK1 485 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 RNF26Q9BY78 433 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 FOXQ1Q9C009 403 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 SMARCAD1Q9H4L7 1026 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 AZI2Q9H6S1 392 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 AGO3Q9H9G7 860 aaKnown RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 LRRC4CQ9HCJ2 640 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 IGSF5Q9NSI5 407 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 ADAM30Q9UKF2 790 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 GINS2Q9Y248 185 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 MTCH2Q9Y6C9 303 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 NFASCO94856 1347 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 NRCAMQ92823 1304 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 NLRC5Q86WI3 1866 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 ATG2AQ2TAZ0 1938 aa6.68□□□□□ -1.34
CDHR3-213ENST00000488386 MYH9P35579 1960 aaKnown RBP6.68□□□□□ -1.34
CDHR3-213ENST00000488386 KIAA1671Q9BY89 1806 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 PRRC2BQ5JSZ5 2229 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms