RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 RPL9P32969 192 aaKnown RBP21.2■□□□□ 0.98
SEC22A-208ENST00000487572 CASP4P49662 377 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 CYP24A1Q07973 514 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 ZCWPW2Q504Y3 356 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 SPATA1Q5VX52 437 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 TAS1R1Q7RTX1 841 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 SLC9A9Q8IVB4 645 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 TRIML1Q8N9V2 468 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 MAFAQ8NHW3 353 aaPredicted RBP21.2■□□□□ 0.98
SEC22A-208ENST00000487572 AUTS2Q8WXX7 1259 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 CCDC127Q96BQ5 260 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 B3GALT6Q96L58 329 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 GPR62Q9BZJ7 368 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 CTNND2Q9UQB3 1225 aa21.2■□□□□ 0.98
SEC22A-208ENST00000487572 PDCD11Q14690 1871 aaKnown RBP21.2■□□□□ 0.98
SEC22A-208ENST00000487572 PPP1R3GB7ZBB8 358 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 I3L4J1 428 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 FSCN2O14926 492 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 DLATP10515 647 aaKnown RBP21.19■□□□□ 0.98
SEC22A-208ENST00000487572 RPL13P26373 211 aaKnown RBP21.19■□□□□ 0.98
SEC22A-208ENST00000487572 PMS1P54277 932 aaKnown RBP21.19■□□□□ 0.98
SEC22A-208ENST00000487572 SURF1Q15526 300 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 DHTKD1Q96HY7 919 aaPredicted RBP21.19■□□□□ 0.98
SEC22A-208ENST00000487572 HERC2P3Q9BVR0 1158 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 ZBP1Q9H171 429 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 NSUN3Q9H649 340 aaKnown RBP21.19■□□□□ 0.98
SEC22A-208ENST00000487572 DPP3Q9NY33 737 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 FRMD4BQ9Y2L6 1034 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 NUB1Q9Y5A7 615 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.19■□□□□ 0.98
SEC22A-208ENST00000487572 SF3B1O75533 1304 aaKnown RBP eCLIP21.19■□□□□ 0.982e-6■■■■■ 43.1
SEC22A-208ENST00000487572 ANK1P16157 1881 aa21.19■□□□□ 0.98
SEC22A-208ENST00000487572 TRANK1O15050 2925 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 C2CD2LO14523 706 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 PPEF2O14830 753 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 SOD2P04179 222 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 PPP1R2P41236 205 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 BRCC3P46736 316 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 ADAM9Q13443 819 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 MYBPC2Q14324 1141 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 SMC1AQ14683 1233 aaKnown RBP21.18■□□□□ 0.98
SEC22A-208ENST00000487572 BMS1Q14692 1282 aaKnown RBP21.18■□□□□ 0.98
SEC22A-208ENST00000487572 PSMD6Q15008 389 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 NFIL3Q16649 462 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 EDRF1Q3B7T1 1238 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 TCEAL5Q5H9L2 206 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 ANKRD40Q6AI12 368 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 CENPPQ6IPU0 288 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 CD300LGQ6UXG3 332 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 ADGRD2Q7Z7M1 963 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 NT5DC4Q86YG4 428 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 CACTINQ8WUQ7 758 aaKnown RBP21.18■□□□□ 0.98
SEC22A-208ENST00000487572 NELFBQ8WX92 580 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 EEF2KMTQ96G04 330 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 MFSD14AQ96MC6 490 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 FNBP1Q96RU3 617 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 STK39Q9UEW8 545 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 PTPRJQ12913 1337 aa21.18■□□□□ 0.98
SEC22A-208ENST00000487572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.17■□□□□ 0.98
SEC22A-208ENST00000487572 HIDE1A8MVS5 230 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 TMEM189-UBE2V1I3L0A0 370 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 CXCL14O95715 111 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 URODP06132 367 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 TMEM191BP0C7N4 346 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 CTSAP10619 480 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 TNNI1P19237 187 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 CCNE1P24864 410 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 LRPAP1P30533 357 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 SKIV2LQ15477 1246 aaKnown RBP21.17■□□□□ 0.98
SEC22A-208ENST00000487572 FAM171A1Q5VUB5 890 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 C9orf57Q5W0N0 161 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 PDE12Q6L8Q7 609 aaKnown RBP21.17■□□□□ 0.98
SEC22A-208ENST00000487572 KIAA1841Q6NSI8 718 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 RBM23Q86U06 439 aaKnown RBP21.17■□□□□ 0.98
SEC22A-208ENST00000487572 CEP57Q86XR8 500 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 TMEM174Q8WUU8 243 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 POP1Q99575 1024 aaKnown RBP21.17■□□□□ 0.98
SEC22A-208ENST00000487572 MTMR12Q9C0I1 747 aa21.17■□□□□ 0.98
SEC22A-208ENST00000487572 NGRNQ9NPE2 291 aaKnown RBP21.17■□□□□ 0.98
SEC22A-208ENST00000487572 AKAP3O75969 853 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 EFEMP2O95967 443 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 TNNC2P02585 160 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 GLUD2P49448 558 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 STX17P56962 302 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 LRRC63Q05C16 580 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 ELAVL2Q12926 359 aaKnown RBP21.16■□□□□ 0.98
SEC22A-208ENST00000487572 USP41Q3LFD5 358 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 WDR49Q8IV35 697 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 RNF168Q8IYW5 571 aaPredicted RBP21.16■□□□□ 0.98
SEC22A-208ENST00000487572 OR5B17Q8NGF7 314 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 ANKRD36BP1Q96IX9 119 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 CGRRF1Q99675 332 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 IGFLR1Q9H665 355 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 INTS13Q9NVM9 706 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 ATG2AQ2TAZ0 1938 aa21.16■□□□□ 0.98
SEC22A-208ENST00000487572 C2orf71A6NGG8 1288 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 PER2O15055 1255 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 CETN3O15182 167 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 TRAPPC3O43617 180 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 ITGB3P05106 788 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms