RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 EIF4BP23588 611 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CST5P28325 142 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 HOXC8P31273 242 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 PDE6CP51160 858 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CRYBB1P53674 252 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 OSTNP61366 133 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 YWHAEP62258 255 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TFAMQ00059 246 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TMEM62Q0P6H9 643 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM32Q13049 653 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 NCOA4Q13772 614 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 SGSM1Q2NKQ1 1148 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 IER5LQ5T953 404 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 LMBRD2Q68DH5 695 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 ALKBH5Q6P6C2 394 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 SLC27A1Q6PCB7 646 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 RUFY4Q6ZNE9 571 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TRAPPC11Q7Z392 1133 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 RNF180Q86T96 592 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CDR2LQ86X02 465 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 FAM71AQ8IYT1 594 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 SLC35F6Q8N357 371 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 SLAIN1Q8ND83 568 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM58Q8NG06 486 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 HELQQ8TDG4 1101 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 DHX38Q92620 1227 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TAF4BQ92750 862 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CPB2Q96IY4 423 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 ACAP3Q96P50 834 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 OSMRQ99650 979 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 NAPGQ99747 312 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 AGPAT1Q99943 283 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CCDC94Q9BW85 323 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 GPR88Q9GZN0 384 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 SAGE1Q9NXZ1 904 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 GTF2IRD1Q9UHL9 959 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 NAGPAQ9UK23 515 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 INTUQ9ULD6 942 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 GINS2Q9Y248 185 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 MYH10P35580 1976 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 PDCD11Q14690 1871 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 FRMPD3Q5JV73 1810 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 UQCRHLA0A096LP55 91 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 A0A0U1RQJ8 604 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 ANO9A1A5B4 782 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 MACROD2A1Z1Q3 448 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 MYADML2A6NDP7 307 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 BTNL10A8MVZ5 291 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 LACTBL1A8MY62 500 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 MAP3K7O43318 606 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 GALR2O43603 387 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 SLU7O95391 586 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 VNN1O95497 513 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 NPTXRO95502 500 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 ASGR1P07306 291 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 UQCRHP07919 91 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 H2AFZP0C0S5 128 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 PNMA6AP0CW24 399 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 CXCL8P10145 99 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 KRT5P13647 590 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 CCND3P30281 292 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 GRM5P41594 1212 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 YARSP54577 528 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 NAP1L1P55209 391 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 WNT7BP56706 349 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 NOP14P78316 857 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 PTPN11Q06124 597 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 CUL2Q13617 745 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 SNX17Q15036 470 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 FAM47CQ5HY64 1035 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 MAP3K21Q5TCX8 1036 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 CXCL17Q6UXB2 119 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 H2AFVQ71UI9 128 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 SESTD1Q86VW0 696 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 ZNF677Q86XU0 584 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 CEP120Q8N960 986 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 KLHDC9Q8NEP7 349 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 OR5B17Q8NGF7 314 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 U2AF1L4Q8WU68 220 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 ATRIPQ8WXE1 791 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 TATDN2Q93075 761 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 FAXDC2Q96IV6 333 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 KREMEN1Q96MU8 473 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 NOX5Q96PH1 765 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 WDR24Q96S15 920 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 PI4K2AQ9BTU6 479 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 CELF4Q9BZC1 486 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 IRX2Q9BZI1 471 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM6Q9C030 488 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 MTMR12Q9C0I1 747 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 PLEKHA5Q9HAU0 1116 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 SEPT11Q9NVA2 429 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 DDX20Q9UHI6 824 aaKnown RBP7.57□□□□□ -1.2
SF3A3-206ENST00000487062 TRPV2Q9Y5S1 764 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 TRIP11Q15643 1979 aa7.57□□□□□ -1.2
SF3A3-206ENST00000487062 PTPRJQ12913 1337 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 MROH7Q68CQ1 1323 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms