RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CCDC169A6NNP5 214 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 UPK3BL1B0FP48 263 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 UPK3BL2E5RIL1 263 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 PROB1E7EW31 1015 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 M0R2C6 588 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ECE2O60344 883 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 MAN1A2O60476 641 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 DOK2O60496 412 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ULK1O75385 1050 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 URI1O94763 535 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 A1BGP04217 495 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 POLR3DP05423 398 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 PDHA1P08559 390 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ALAS2P22557 587 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 TNFSF4P23510 183 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 MAPK3P27361 379 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 PBLDP30039 288 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 MC4RP32245 332 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 PRIM2P49643 509 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 MAPK10P53779 464 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 GDF10P55107 478 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 IL2P60568 153 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 PSMA6P60900 246 aaKnown RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 SUMO1P63165 101 aaKnown RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 CCDC173Q0VFZ6 552 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 MPP2Q14168 576 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ZNF267Q14586 743 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 KCNB1Q14721 858 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ZNF362Q5T0B9 420 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 ZNF530Q6P9A1 599 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 VHLLQ6RSH7 139 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 TPTE2Q6XPS3 522 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 NUP54Q7Z3B4 507 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 TMEM110Q86TL2 294 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 NLRP10Q86W26 655 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 TMCO5AQ8N6Q1 288 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ZNF527Q8NB42 609 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 SUPT20HQ8NEM7 779 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 CTCFLQ8NI51 663 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.99□□□□□ -1.455e-6■■■■□ 19.4
SF1-217ENST00000486960 RUBCNQ92622 972 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 HPS3Q969F9 1004 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 OPTNQ96CV9 577 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ACO2Q99798 780 aaKnown RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 SLC4A5Q9BY07 1137 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 TRIM39Q9HCM9 518 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 MCM9Q9NXL9 1143 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ZSWIM5Q9P217 1185 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 TBC1D29Q9UFV1 150 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 SERTAD1Q9UHV2 236 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 RABGEF1Q9UJ41 708 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 CAB39Q9Y376 341 aaPredicted RBP5.99□□□□□ -1.45
SF1-217ENST00000486960 PCDHGB5Q9Y5G0 923 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 SLC12A7Q9Y666 1083 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 ABCC4O15439 1325 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 FLT1P17948 1338 aa5.99□□□□□ -1.45
SF1-217ENST00000486960 OTOGLQ3ZCN5 2332 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CEMIPQ8WUJ3 1361 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 ARPC4-TTLL3A0A0A6YYG9 625 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 A0A0B4J269 797 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 BTBD19C9JJ37 291 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 FAM227AF5H4B4 570 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 AP3B1O00203 1094 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CACNB4O00305 520 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 ADAMTS3O15072 1205 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TXNL1O43396 289 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 STX6O43752 255 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 SRGAP2O75044 1071 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 PHACTR2O75167 634 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 ADAMTS4O75173 837 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 EOMESO95936 686 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 F13A1P00488 732 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 RHOXF2BP0C7M4 288 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TOP1P11387 765 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 PCP11498 1178 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 GAP43P17677 238 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 PAMP19021 973 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 HLA-DPA1P20036 260 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 NF2P35240 595 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 IGFALSP35858 605 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 SKIV2L2P42285 1042 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 NOP2P46087 812 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 FLT3LGP49771 235 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 SULT1E1P49888 294 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 C21orf58P58505 322 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 NLRP5P59047 1200 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 PPARDQ03181 441 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CLCQ05315 142 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 IKQ13123 557 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 ZNF460Q14592 562 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TAF5Q15542 800 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CCDC152Q4G0S7 254 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TRIM61Q5EBN2 209 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TBCELQ5QJ74 424 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CCDC183Q5T5S1 534 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 KRT40Q6A162 431 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 RPUSD3Q6P087 351 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 POMZP3Q6PJE2 187 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms