RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PTGESO14684 152 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 AP5Z1O43299 807 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 EFCAB14O75071 495 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 IL18RAPO95256 599 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 AMHP03971 560 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 NFICP08651 508 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 DLATP10515 647 aaKnown RBP13.84□□□□□ -0.19
HDAC6-229ENST00000486665 KCNE1P15382 129 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 MLH1P40692 756 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 CLDN10P78369 228 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 PPP2R3AQ06190 1150 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 PPP3CAQ08209 521 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-229ENST00000486665 GLRA4Q5JXX5 417 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 JADE1Q6IE81 842 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 OR5B17Q8NGF7 314 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 SLC35C1Q96A29 364 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 TUBGCP2Q9BSJ2 902 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 VPS16Q9H269 839 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 ASB7Q9H672 318 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 CD320Q9NPF0 282 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 UBN1Q9NPG3 1134 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 CNTN3Q9P232 1028 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
HDAC6-229ENST00000486665 LINC01553A4QN01 128 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 INPPL1O15357 1258 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 GJB5O95377 273 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 SCNN1GP51170 649 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 GUCY2FP51841 1108 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.2
HDAC6-229ENST00000486665 TPM4P67936 248 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 FANCCQ00597 558 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 ENPEPQ07075 957 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 SURF1Q15526 300 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 ZBTB6Q15916 424 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 VWA3BQ502W6 1294 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 DCAF17Q5H9S7 520 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-229ENST00000486665 MIIPQ5JXC2 388 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 TCERG1LQ5VWI1 586 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 CD302Q8IX05 232 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 HLA-CQ95604 372 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-229ENST00000486665 KIF12Q96FN5 646 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-229ENST00000486665 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 FNBP1Q96RU3 617 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 COG5Q9UP83 839 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
HDAC6-229ENST00000486665 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDAC6-229ENST00000486665 ATG2AQ2TAZ0 1938 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 FSD2A1L4K1 749 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 DGKIO75912 1065 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 POMCP01189 267 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 C4BPAP04003 597 aaKnown RBP13.82□□□□□ -0.2
HDAC6-229ENST00000486665 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-229ENST00000486665 TNNI1P19237 187 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 GCLMP48507 274 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 TFAMQ00059 246 aaKnown RBP13.82□□□□□ -0.2
HDAC6-229ENST00000486665 KCNH2Q12809 1159 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 TMEM132DQ14C87 1099 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 NAB2Q15742 525 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 MAN2A1Q16706 1144 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 CBWD6Q4V339 395 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 NOMO2Q5JPE7 1267 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 CBWD3Q5JTY5 395 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 CBWD5Q5RIA9 395 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 GLB1LQ6UWU2 654 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 WDR49Q8IV35 697 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 PPP1R10Q96QC0 940 aaKnown RBP13.82□□□□□ -0.2
HDAC6-229ENST00000486665 ZBED2Q9BTP6 218 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 C11orf16Q9NQ32 467 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 DERAQ9Y315 318 aa13.82□□□□□ -0.2
HDAC6-229ENST00000486665 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 AFPP02771 609 aaKnown RBP13.81□□□□□ -0.2
HDAC6-229ENST00000486665 PLA2G5P39877 138 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 ERVK-21P61565 698 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 SOX4Q06945 474 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-229ENST00000486665 DUOXA2Q1HG44 320 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 UVSSAQ2YD98 709 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 SV2AQ7L0J3 742 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 ZNF280BQ86YH2 543 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 RPS6KC1Q96S38 1066 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 RAD9AQ99638 391 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 C17orf80Q9BSJ5 609 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 LRFN3Q9BTN0 628 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 MTMR12Q9C0I1 747 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 NDST4Q9H3R1 872 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-229ENST00000486665 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 C2CD2Q9Y426 696 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 TTC3P53804 2025 aa13.81□□□□□ -0.2
HDAC6-229ENST00000486665 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
HDAC6-229ENST00000486665 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms