RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CCDC65Q8IXS2 484 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 KREMEN2Q8NCW0 462 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 C3orf58Q8NDZ4 430 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 CMASQ8NFW8 434 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 HDAC7Q8WUI4 952 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 STAMQ92783 540 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 ACSF2Q96CM8 615 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 HAPLN2Q9GZV7 340 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 TNMDQ9H2S6 317 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 FAM13BQ9NYF5 915 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 UBQLN1Q9UMX0 589 aaKnown RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 C2CD4DB7Z1M9 353 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 TULP1O00294 542 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-208ENST00000486404 GPR37L1O60883 481 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 C1RP00736 705 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ASIC1P78348 528 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 AMPD3Q01432 767 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 SPAG1Q07617 926 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ZBTB41Q5SVQ8 909 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ADALQ6DHV7 355 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ANKS3Q6ZW76 656 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 IQUBQ8NA54 791 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 LNX1Q8TBB1 728 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-208ENST00000486404 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ACCSQ96QU6 501 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 FIZ1Q96SL8 496 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 MAGEF1Q9HAY2 307 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 OLFML3Q9NRN5 406 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 PANK4Q9NVE7 773 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 ZDHHC7Q9NXF8 308 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 MTRRQ9UBK8 725 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 FBXW11Q9UKB1 542 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 HCN4Q9Y3Q4 1203 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 CDY1Q9Y6F8 540 aa14.02□□□□□ -0.17
CHMP3-208ENST00000486404 CLUHO75153 1309 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 A0A0B4J269 797 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 LACTBL1A8MY62 500 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 PRR33A8MZF0 331 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 SYN3O14994 580 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 MEFVO15553 781 aaPredicted RBP14.01□□□□□ -0.17
CHMP3-208ENST00000486404 RFPL2O75678 378 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 COL9A1P20849 921 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 DNM1Q05193 864 aaKnown RBP14.01□□□□□ -0.17
CHMP3-208ENST00000486404 BECN1Q14457 450 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 TMEM132DQ14C87 1099 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 PTPN21Q16825 1174 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
CHMP3-208ENST00000486404 SLC39A4Q6P5W5 647 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 CYP26C1Q6V0L0 522 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 OTOP3Q7RTS5 596 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 ZNF720Q7Z2F6 126 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 CD302Q8IX05 232 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 BEST2Q8NFU1 509 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
CHMP3-208ENST00000486404 DNAJC19Q96DA6 116 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 CLSTN3Q9BQT9 956 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 LRFN3Q9BTN0 628 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 AGO2Q9UKV8 859 aaKnown RBP14.01□□□□□ -0.17
CHMP3-208ENST00000486404 USTQ9Y2C2 406 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
CHMP3-208ENST00000486404 FRMD3A2A2Y4 597 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 TISP43B9A030 160 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 ANKRD63C9JTQ0 380 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 H7C4K7 107 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 FAM189A1O60320 539 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 XYLBO75191 536 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 PPP1R37O75864 691 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 C8AP07357 584 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 CYP3A5P20815 502 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 GBP2P32456 591 aaPredicted RBP14□□□□□ -0.17
CHMP3-208ENST00000486404 OR1D2P34982 312 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 KRT85P78386 507 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 MTMR3Q13615 1198 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 POSTNQ15063 836 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 E2F4Q16254 413 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 PPM1LQ5SGD2 360 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
CHMP3-208ENST00000486404 ZNF280DQ6N043 979 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 APPL2Q8NEU8 664 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 SLC7A14Q8TBB6 771 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 TSPAN18Q96SJ8 248 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 PYM1Q9BRP8 204 aaKnown RBP14□□□□□ -0.17
CHMP3-208ENST00000486404 C11orf16Q9NQ32 467 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 CPSF3Q9UKF6 684 aaKnown RBP14□□□□□ -0.17
CHMP3-208ENST00000486404 POLIQ9UNA4 740 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 BACE2Q9Y5Z0 518 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 DOCK8Q8NF50 2099 aa14□□□□□ -0.17
CHMP3-208ENST00000486404 MYO10Q9HD67 2058 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 POLR2DO15514 142 aaKnown RBP13.99□□□□□ -0.17
CHMP3-208ENST00000486404 ADAM12O43184 909 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 ZMYND10O75800 440 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 NFICP08651 508 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms