RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 A6NJR5 290 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 TMCO5BA8MYB1 307 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 INO80B-WBP1J3KQ70 363 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 PHACTR2O75167 634 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 LSM8O95777 96 aaKnown RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 KRT5P13647 590 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 EPHB4P54760 987 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 INHBEP58166 350 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 CASP8Q14790 479 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 OLFML2BQ68BL8 750 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 APBB1IPQ7Z5R6 666 aaPredicted RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 PHF13Q86YI8 300 aaPredicted RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 OR5B17Q8NGF7 314 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 CD101Q93033 1021 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 CAVIN3Q969G5 261 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 MS4A14Q96JA4 679 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 PKNOX2Q96KN3 472 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 NLRP4Q96MN2 994 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 PI4K2AQ9BTU6 479 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 CDT1Q9H211 546 aa12.81□□□□□ -0.36
PKP4-213ENST00000486254 APOBEC3GQ9HC16 384 aaKnown RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.81□□□□□ -0.36
PKP4-213ENST00000486254 PACSIN2Q9UNF0 486 aaPredicted RBP12.81□□□□□ -0.36
PKP4-213ENST00000486254 TTLL13PA6NNM8 815 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
PKP4-213ENST00000486254 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
PKP4-213ENST00000486254 F2P00734 622 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 IGHA2P01877 340 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 TNNC2P02585 160 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 SMPD1P17405 629 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 SLC1A1P43005 524 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.36
PKP4-213ENST00000486254 PPFIA1Q13136 1202 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 CD302Q8IX05 232 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 MCOLN2Q8IZK6 566 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ZNF564Q8TBZ8 553 aaPredicted RBP12.8□□□□□ -0.36
PKP4-213ENST00000486254 TRAPPC12Q8WVT3 735 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 SOCS4Q8WXH5 440 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 USP6NLQ92738 828 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ZNF653Q96CK0 615 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ANKRD36BP1Q96IX9 119 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ARID3AQ99856 593 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ZSWIM1Q9BR11 485 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ZNF518BQ9C0D4 1074 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 ALG6Q9Y672 507 aa12.8□□□□□ -0.36
PKP4-213ENST00000486254 CEP104O60308 925 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 TMEM191BP0C7N4 346 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 ATICP31939 592 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 CDH5P33151 784 aaPredicted RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 CTNNA1P35221 906 aaKnown RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 TNFSF9P41273 254 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 NSFP46459 744 aaKnown RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 PTP4A2Q12974 167 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 PAK2Q13177 524 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 CUL1Q13616 776 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 GRIK4Q16099 956 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 CST9Q5W186 159 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 LMBRD2Q68DH5 695 aaPredicted RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 MON1BQ7L1V2 547 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 TTC39CQ8N584 583 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 RBBP8NLQ8NC74 664 aaPredicted RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 OR6J1Q8NGC5 347 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 SEC14L1Q92503 715 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 NUP85Q9BW27 656 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 XYLT2Q9H1B5 865 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 GOLPH3Q9H4A6 298 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 MINDY3Q9H8M7 445 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 RPF1Q9H9Y2 349 aaKnown RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 RRAGCQ9HB90 399 aa12.79□□□□□ -0.36
PKP4-213ENST00000486254 DMGDHQ9UI17 866 aaKnown RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 GNEQ9Y223 722 aaKnown RBP12.79□□□□□ -0.36
PKP4-213ENST00000486254 CITO14578 2027 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 MBLAC1A4D2B0 266 aaPredicted RBP12.78□□□□□ -0.36
PKP4-213ENST00000486254 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 GNA15P30679 374 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 HUNKP57058 714 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 NOMO3P69849 1222 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 TRPC3Q13507 836 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 SMC1AQ14683 1233 aaKnown RBP12.78□□□□□ -0.36
PKP4-213ENST00000486254 DCAF4L1Q3SXM0 396 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 LIN9Q5TKA1 542 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 DNAAF5Q86Y56 855 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 MREGQ8N565 214 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms