RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SCP2P22307 547 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 FGFR3P22607 806 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 MCM4P33991 863 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 GUCY2FP51841 1108 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 ZXDAP98168 799 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 DNM1Q05193 864 aaKnown RBP19.22■□□□□ 0.67
COL6A1-204ENST00000486023 ENOX2Q16206 610 aaKnown RBP19.22■□□□□ 0.67
COL6A1-204ENST00000486023 LIN9Q5TKA1 542 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 LILRA6Q6PI73 481 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 GPR65Q8IYL9 337 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 SYCP3Q8IZU3 236 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 ACSF2Q96CM8 615 aaPredicted RBP19.22■□□□□ 0.67
COL6A1-204ENST00000486023 PLEKHA5Q9HAU0 1116 aa19.22■□□□□ 0.67
COL6A1-204ENST00000486023 PRR33A8MZF0 331 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 PIGRP01833 764 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 GBP2P32456 591 aaPredicted RBP19.21■□□□□ 0.67
COL6A1-204ENST00000486023 ABCD1P33897 745 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 KCNA1Q09470 495 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 KYAT1Q16773 422 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 PPM1LQ5SGD2 360 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 SHC4Q6S5L8 630 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 RSPO2Q6UXX9 243 aaPredicted RBP19.21■□□□□ 0.67
COL6A1-204ENST00000486023 C15orf39Q6ZRI6 1047 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 POMGNT1Q8WZA1 660 aa19.21■□□□□ 0.67
COL6A1-204ENST00000486023 AGO2Q9UKV8 859 aaKnown RBP19.21■□□□□ 0.67
COL6A1-204ENST00000486023 MORC2Q9Y6X9 1032 aaPredicted RBP19.21■□□□□ 0.67
COL6A1-204ENST00000486023 TTC26A0AVF1 554 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 ZMYND10O75800 440 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 C8AP07357 584 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 PTPN21Q16825 1174 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 VARS2Q5ST30 1063 aaKnown RBP19.2■□□□□ 0.66
COL6A1-204ENST00000486023 SLFN12LQ6IEE8 588 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 TRIM67Q6ZTA4 783 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 ANKS3Q6ZW76 656 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 OTOP3Q7RTS5 596 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 CMASQ8NFW8 434 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-204ENST00000486023 KCNG4Q8TDN1 519 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 HDAC7Q8WUI4 952 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 HPS3Q969F9 1004 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 ZNF707Q96C28 371 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-204ENST00000486023 ACCSQ96QU6 501 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 PRKD2Q9BZL6 878 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 MTRRQ9UBK8 725 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 SEL1LQ9UBV2 794 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 CFAP45Q9UL16 551 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 UBQLN1Q9UMX0 589 aaKnown RBP19.2■□□□□ 0.66
COL6A1-204ENST00000486023 PCDHB13Q9Y5F0 798 aa19.2■□□□□ 0.66
COL6A1-204ENST00000486023 TIMM13Q9Y5L4 95 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-204ENST00000486023 CCL16O15467 120 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 POLR2DO15514 142 aaKnown RBP19.19■□□□□ 0.66
COL6A1-204ENST00000486023 PRPF6O94906 941 aaKnown RBP19.19■□□□□ 0.66
COL6A1-204ENST00000486023 CASP5P51878 434 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 AXDND1Q5T1B0 1012 aaPredicted RBP19.19■□□□□ 0.66
COL6A1-204ENST00000486023 JADE1Q6IE81 842 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 DSTYKQ6XUX3 929 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 HFE2Q6ZVN8 426 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 CCDC65Q8IXS2 484 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 PLCD3Q8N3E9 789 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 IQUBQ8NA54 791 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 ST13P5Q8NFI4 369 aaPredicted RBP19.19■□□□□ 0.66
COL6A1-204ENST00000486023 SLC7A14Q8TBB6 771 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 PBXIP1Q96AQ6 731 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 SMOC2Q9H3U7 446 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 ST6GALNAC4Q9H4F1 302 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 FAM13BQ9NYF5 915 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 CPSF3Q9UKF6 684 aaKnown RBP19.19■□□□□ 0.66
COL6A1-204ENST00000486023 PCDHA7Q9UN72 937 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 EXOC7Q9UPT5 735 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 HCN4Q9Y3Q4 1203 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 MYH11P35749 1972 aa19.19■□□□□ 0.66
COL6A1-204ENST00000486023 TMEM221A6NGB7 291 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 M0R296 226 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 XPOTO43592 962 aaKnown RBP19.18■□□□□ 0.66
COL6A1-204ENST00000486023 FAM189A1O60320 539 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 ASIC1P78348 528 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 RAB33AQ14088 237 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 CTXN3Q4LDR2 81 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 L1TD1Q5T7N2 865 aaKnown RBP19.18■□□□□ 0.66
COL6A1-204ENST00000486023 GET4Q7L5D6 327 aaPredicted RBP19.18■□□□□ 0.66
COL6A1-204ENST00000486023 GRASPQ7Z6J2 395 aaPredicted RBP19.18■□□□□ 0.66
COL6A1-204ENST00000486023 KCNN1Q92952 543 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 CHAMP1Q96JM3 812 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 FGFBP2Q9BYJ0 223 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 LRRC27Q9C0I9 530 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 WDR6Q9NNW5 1121 aaKnown RBP19.18■□□□□ 0.66
COL6A1-204ENST00000486023 ZDHHC7Q9NXF8 308 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 FBXW11Q9UKB1 542 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 USTQ9Y2C2 406 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 BACE2Q9Y5Z0 518 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 TRIOO75962 3097 aa19.18■□□□□ 0.66
COL6A1-204ENST00000486023 GOLGA8IPA6NC78 632 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 GOLGA8JA6NMD2 632 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 H7C4K7 107 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 NFICP08651 508 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 CASP1P29466 404 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 ELF1P32519 619 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 NTHL1P78549 312 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 AMPD3Q01432 767 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 TMEM132DQ14C87 1099 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms