RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 MBTPS2O43462 519 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 KLRC4O43908 158 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 HOXD13P35453 343 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 EHHADHQ08426 723 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 KCNC3Q14003 757 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 POSTNQ15063 836 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 KMT5BQ4FZB7 885 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 ANKRD54Q6NXT1 300 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 CD300LGQ6UXG3 332 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 CRELD2Q6UXH1 353 aaPredicted RBP17.64■□□□□ 0.41
DDR1-246ENST00000485023 EPM2AIP1Q7L775 607 aaPredicted RBP17.64■□□□□ 0.41
DDR1-246ENST00000485023 SCFD1Q8WVM8 642 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 CDH22Q9UJ99 828 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 UBQLN1Q9UMX0 589 aaKnown RBP17.64■□□□□ 0.41
DDR1-246ENST00000485023 SSX2IPQ9Y2D8 614 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 NUB1Q9Y5A7 615 aa17.64■□□□□ 0.41
DDR1-246ENST00000485023 VCANP13611 3396 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 TMEM189-UBE2V1I3L0A0 370 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 EIF3DO15371 548 aaKnown RBP eCLIP17.63■□□□□ 0.41
DDR1-246ENST00000485023 ZNF202O95125 648 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 TKTP29401 623 aaKnown RBP17.63■□□□□ 0.41
DDR1-246ENST00000485023 SMAD4Q13485 552 aaKnown RBP17.63■□□□□ 0.41
DDR1-246ENST00000485023 TMEM132DQ14C87 1099 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 PALB2Q86YC2 1186 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 C12orf76Q8N812 135 aaPredicted RBP17.63■□□□□ 0.41
DDR1-246ENST00000485023 SLC22A17Q8WUG5 538 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 DDX27Q96GQ7 796 aaKnown RBP17.63■□□□□ 0.41
DDR1-246ENST00000485023 TTPALQ9BTX7 342 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 CITO14578 2027 aa17.63■□□□□ 0.41
DDR1-246ENST00000485023 TRIP11Q15643 1979 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 PPEF2O14830 753 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 RPN1P04843 607 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 ADH1AP07327 375 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 SPATA31D3P0C874 917 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 GARTP22102 1010 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 RPL9P32969 192 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 MCM4P33991 863 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 CLCN4P51793 760 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 WNT7BP56706 349 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 ELAVL2Q12926 359 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 STK4Q13043 487 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 PSMD5Q16401 504 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 PUS10Q3MIT2 529 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 RARS2Q5T160 578 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 SYCE2Q6PIF2 218 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 TMEM184AQ6ZMB5 413 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 SPATA31D4Q6ZUB0 917 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 SMRP1Q8NCR6 262 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 KIAA0895Q8NCT3 520 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 ZNF507Q8TCN5 953 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 FAM84AQ96KN4 292 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 RBAKQ9NYW8 714 aaPredicted RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 USP15Q9Y4E8 981 aaPredicted RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 UBE4BO95155 1302 aa17.62■□□□□ 0.41
DDR1-246ENST00000485023 PDCD11Q14690 1871 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 TCF20Q9UGU0 1960 aaKnown RBP17.62■□□□□ 0.41
DDR1-246ENST00000485023 BRWD1Q9NSI6 2320 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 CLIC2O15247 247 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
DDR1-246ENST00000485023 TRAPPC3O43617 180 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 EXTL3O43909 919 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 WEE2P0C1S8 567 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 CYP2J2P51589 502 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 ZBTB6Q15916 424 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 PPFIBP1Q86W92 1011 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 CD302Q8IX05 232 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 EFCAB13Q8IY85 973 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 GPD1LQ8N335 351 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 BEST2Q8NFU1 509 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 FEZF2Q8TBJ5 459 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 FBXL18Q96ME1 805 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 RXFP1Q9HBX9 757 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 AGPAT3Q9NRZ7 376 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 HSPBP1Q9NZL4 362 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 FAM50BQ9Y247 325 aa17.61■□□□□ 0.41
DDR1-246ENST00000485023 ADAM12O43184 909 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 TGFB1I1O43294 461 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 GLUD1P00367 558 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 ADRB2P07550 413 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 FGFR3P22607 806 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 DPYDQ12882 1025 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 SPATA1Q5VX52 437 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 TMC5Q6UXY8 1006 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 CBWD2Q8IUF1 395 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 BRSK2Q8IWQ3 736 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
DDR1-246ENST00000485023 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
DDR1-246ENST00000485023 PIK3R5Q8WYR1 880 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 ASB7Q9H672 318 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 MAN1C1Q9NR34 630 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.6■□□□□ 0.41
DDR1-246ENST00000485023 DZANK1Q9NVP4 752 aa17.6■□□□□ 0.41
DDR1-246ENST00000485023 GADD45BO75293 160 aaPredicted RBP17.59■□□□□ 0.41
DDR1-246ENST00000485023 IL18RAPO95256 599 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 LDHAP00338 332 aaKnown RBP17.59■□□□□ 0.41
DDR1-246ENST00000485023 MYL1P05976 194 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 CYP3A5P20815 502 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms