RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 RAPGEF1Q13905 1077 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 ARHGEF19Q8IW93 802 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 C1orf127Q8N9H9 656 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 DBF4BQ8NFT6 615 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 LINC01599Q8WXQ3 324 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 PI4K2AQ9BTU6 479 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 CXCL16Q9H2A7 254 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 ITGA11Q9UKX5 1188 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 MYO6Q9UM54 1294 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 GIT1Q9Y2X7 761 aa22.04■■□□□ 1.12
VCPKMT-203ENST00000484763 ATF7P17544 494 aaPredicted RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 CCZ1BP86790 482 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 CCZ1P86791 482 aaPredicted RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 GLRA4Q5JXX5 417 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 SLC24A5Q71RS6 500 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 PPM1KQ8N3J5 372 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 LPPQ93052 612 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 BAG1Q99933 345 aaPredicted RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 UBE2TQ9NPD8 197 aaPredicted RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 DPP3Q9NY33 737 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 AJAP1Q9UKB5 411 aaPredicted RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 UBQLN1Q9UMX0 589 aaKnown RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 SMIM28A0A1B0GU29 152 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 MEIS3P2A8K0S8 358 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 XPOTO43592 962 aaKnown RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 ITGB3P05106 788 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 KRT19P08727 400 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 JAM2P57087 298 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 ZBTB6Q15916 424 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 AGMOQ6ZNB7 445 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 RTN4RL1Q86UN2 441 aaPredicted RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 ECHDC2Q86YB7 292 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 BEST2Q8NFU1 509 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 FAM81BQ96LP2 452 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 STK33Q9BYT3 514 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 UBN1Q9NPG3 1134 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 ZNHIT6Q9NWK9 470 aaKnown RBP22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 SIX4Q9UIU6 781 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 PLAGL2Q9UPG8 496 aa22.03■■□□□ 1.12
VCPKMT-203ENST00000484763 TET1Q8NFU7 2136 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 C9IYK1 514 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 CLSTN1O94985 981 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 ASS1P00966 412 aaKnown RBP22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 CST3P01034 146 aaPredicted RBP22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 FECHP22830 423 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 NOP14P78316 857 aaKnown RBP22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 GCNT1Q02742 428 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 SGSM1Q2NKQ1 1148 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 TMEM139Q8IV31 216 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 HELQQ8TDG4 1101 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 SYN2Q92777 582 aaPredicted RBP22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 RPS6KC1Q96S38 1066 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 RSAD1Q9HA92 442 aa22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 PRDM5Q9NQX1 630 aaPredicted RBP22.02■■□□□ 1.12
VCPKMT-203ENST00000484763 HNRNPH3P31942 346 aaKnown RBP22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 RFC2P35250 354 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 MLH1P40692 756 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 MFAP3P55082 362 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 MYL6P60660 151 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 MEA1Q16626 185 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 SFMBT2Q5VUG0 894 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 ZNF598Q86UK7 904 aaKnown RBP22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 RNF169Q8NCN4 708 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 CXorf38Q8TB03 319 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 ZFP42Q96MM3 310 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 TUBGCP4Q9UGJ1 667 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 R3HCC1Q9Y3T6 440 aaKnown RBP22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 F8VZ95 297 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 KIAA0355O15063 1070 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 EOMESO95936 686 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 SKILP12757 684 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 IBSPP21815 317 aaPredicted RBP22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 ZNF699Q32M78 642 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 SCARA3Q6AZY7 606 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 ENOSF1Q7L5Y1 443 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 TAF4BQ92750 862 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 TATDN2Q93075 761 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 GAD1Q99259 594 aa22.01■■□□□ 1.11
VCPKMT-203ENST00000484763 ARL5CA6NH57 179 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 PTGESO14684 152 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 TIMP1P01033 207 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 CYP3A5P20815 502 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 POLR2BP30876 1174 aaKnown RBP22■■□□□ 1.11
VCPKMT-203ENST00000484763 GUCY2FP51841 1108 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 FAM189BP81408 668 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 DRAP1Q14919 205 aaPredicted RBP22■■□□□ 1.11
VCPKMT-203ENST00000484763 ARHGAP44Q17R89 818 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 SPOPLQ6IQ16 392 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 FMNL3Q8IVF7 1028 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 C18orf25Q96B23 403 aaPredicted RBP22■■□□□ 1.11
VCPKMT-203ENST00000484763 ELMO3Q96BJ8 720 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 XYLT2Q9H1B5 865 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 APOBEC3GQ9HC16 384 aaKnown RBP22■■□□□ 1.11
VCPKMT-203ENST00000484763 ALPK3Q96L96 1907 aa22■■□□□ 1.11
VCPKMT-203ENST00000484763 ATICP31939 592 aa21.99■■□□□ 1.11
VCPKMT-203ENST00000484763 STAT1P42224 750 aa21.99■■□□□ 1.11
VCPKMT-203ENST00000484763 RBP5P82980 135 aa21.99■■□□□ 1.11
VCPKMT-203ENST00000484763 E4F1Q66K89 784 aaPredicted RBP21.99■■□□□ 1.11
VCPKMT-203ENST00000484763 WDR59Q6PJI9 974 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms