RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SYNE3Q6ZMZ3 975 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 MFSD6Q6ZSS7 791 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 USP53Q70EK8 1073 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.99□□□□□ -1.61
SPTA1-206ENST00000484520 IQCA1Q86XH1 822 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 NIM1KQ8IY84 436 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 IFNL3Q8IZI9 196 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 CACTINQ8WUQ7 758 aaKnown RBP4.99□□□□□ -1.61
SPTA1-206ENST00000484520 STAG1Q8WVM7 1258 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 ESR2Q92731 530 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 TEKT1Q969V4 418 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 TMX3Q96JJ7 454 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 TTC14Q96N46 770 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 GBP4Q96PP9 640 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 SEC62Q99442 399 aaKnown RBP4.99□□□□□ -1.61
SPTA1-206ENST00000484520 KCNJ15Q99712 375 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 RIOK1Q9BRS2 568 aaKnown RBP4.99□□□□□ -1.61
SPTA1-206ENST00000484520 LLPHQ9BRT6 129 aaKnown RBP4.99□□□□□ -1.61
SPTA1-206ENST00000484520 ANP32EQ9BTT0 268 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 PHF20Q9BVI0 1012 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 AGXT2Q9BYV1 514 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 IL25Q9H293 177 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 TAOK3Q9H2K8 898 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 ATP6V1DQ9Y5K8 247 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 UTRNP46939 3433 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 MAST2Q6P0Q8 1798 aa4.99□□□□□ -1.61
SPTA1-206ENST00000484520 SNED1Q8TER0 1413 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 LTBP1Q14766 1721 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ESYT3A0FGR9 886 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 GSG1L2A8MUP6 293 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 E7EWF7 191 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 GOLGA6L22H0YM25 854 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ACOT7O00154 380 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 SNAP23O00161 211 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 PPIP5K2O43314 1243 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ORC4O43929 436 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ECE2O60344 883 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 CUTAO60888 179 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 FGRP09769 529 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 CALM1P0DP23 149 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 CALM2P0DP24 149 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 CALM3P0DP25 149 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 GNAT1P11488 350 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 DPEP1P16444 411 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 PRDX5P30044 214 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 CHRNA5P30532 468 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 LIFRP42702 1097 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 EVCP57679 992 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 PPP2R2AP63151 447 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 PPARAQ07869 468 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 SPIRE1Q08AE8 756 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 TNIP1Q15025 636 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 CCDC129Q6ZRS4 1044 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 FAM177A1Q8N128 213 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 LCORLQ8N3X6 602 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ZNF808Q8N4W9 903 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 AGBL3Q8NEM8 1001 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 MICAL1Q8TDZ2 1067 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 JDP2Q8WYK2 163 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ZNF274Q96GC6 653 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 UBAC1Q9BSL1 405 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 UPF3BQ9BZI7 483 aaKnown RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 DHX36Q9H2U1 1008 aaKnown RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 C12orf65Q9H3J6 166 aaKnown RBP4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ACBD3Q9H3P7 528 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 SLC39A2Q9NP94 309 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 TMOD2Q9NZR1 351 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 INPP5FQ9Y2H2 1132 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 NR2E1Q9Y466 385 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 NUB1Q9Y5A7 615 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 ROBO3Q96MS0 1386 aa4.98□□□□□ -1.61
SPTA1-206ENST00000484520 PCSK5Q92824 1860 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 COL2A1P02458 1487 aaPredicted RBP4.97□□□□□ -1.61
SPTA1-206ENST00000484520 MATN2O00339 956 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 DLX3O60479 287 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 TOMM70O94826 608 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 HLA-DOAP06340 250 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 KCNA3P22001 575 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 GRK2P25098 689 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 ACRV1P26436 265 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 GRK3P35626 688 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 BTDP43251 543 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 AK2P54819 239 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 EXOSC10Q01780 885 aaKnown RBP4.97□□□□□ -1.61
SPTA1-206ENST00000484520 DUSP8Q13202 625 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 ZMAT1Q5H9K5 638 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 DACT2Q5SW24 774 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 FNDC7Q5VTL7 733 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 FKBP1CQ5VVH2 108 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 SGMS1Q86VZ5 419 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 LDLRAD3Q86YD5 345 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 MB21D2Q8IYB1 491 aaPredicted RBP4.97□□□□□ -1.61
SPTA1-206ENST00000484520 TEX11Q8IYF3 940 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 MIGA1Q8NAN2 632 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 WASF1Q92558 559 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 IER2Q9BTL4 223 aa4.97□□□□□ -1.61
SPTA1-206ENST00000484520 SLKQ9H2G2 1235 aaPredicted RBP4.97□□□□□ -1.61
SPTA1-206ENST00000484520 MMRN2Q9H8L6 949 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms