RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 SCRN1Q12765 414 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 NR5A1Q13285 461 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 GLRA4Q5JXX5 417 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 NT5DC1Q5TFE4 455 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 Q6ZS52 159 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 TRIM22Q8IYM9 498 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 TCEAL8Q8IYN2 117 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 HACE1Q8IYU2 909 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 TMEM130Q8N3G9 435 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 FAM3CQ92520 227 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 SECISBP2LQ93073 1101 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 TRPV4Q9HBA0 871 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 PRMT7Q9NVM4 692 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 CEP72Q9P209 647 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 F5P12259 2224 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 SMIM28A0A1B0GU29 152 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 CHURC1-FNTBB4DL54 471 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 ACKR2O00590 384 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 MAN2B1O00754 1011 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 B3GAT3O94766 335 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 XRCC6P12956 609 aaKnown RBP eCLIP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 ATF2P15336 505 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 GJA1P17302 382 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 PSMC3P17980 439 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 FNTBP49356 437 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 MLLT6P55198 1093 aaPredicted RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 SHC2P98077 582 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 ELAVL2Q12926 359 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 STK3Q13188 491 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 PTGDRQ13258 359 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 N4BP2L1Q5TBK1 243 aaPredicted RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 PDXDC1Q6P996 788 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 MAEAQ7L5Y9 396 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 CATSPER3Q86XQ3 398 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 SLFN12Q8IYM2 578 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 FAM160A2Q8N612 972 aaPredicted RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 CEP120Q8N960 986 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 CORO1BQ9BR76 489 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 IER2Q9BTL4 223 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 MKNK1Q9BUB5 465 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 KIFC3Q9BVG8 833 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 TRMT61BQ9BVS5 477 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 TTC12Q9H892 705 aaPredicted RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 ZFP14Q9HCL3 533 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 PTPRHQ9HD43 1115 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 RBM12Q9NTZ6 932 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 GMEB2Q9UKD1 530 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 PCDHA12Q9UN75 941 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 WASF3Q9UPY6 502 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 MRPS17Q9Y2R5 130 aaKnown RBP9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 PIAS3Q9Y6X2 628 aa9.52□□□□□ -0.89
RTFDC1-208ENST00000484084 GREB1Q4ZG55 1949 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 CCDC194A0A1B0GVG4 234 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 LRRIQ4A6NIV6 560 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 ABLIM1O14639 778 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 USO1O60763 962 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 MED24O75448 989 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 CCNE1P24864 410 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 GDI1P31150 447 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 CXCL12P48061 93 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 SOX9P48436 509 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 CCR3P51677 355 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 NRLP54845 237 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 PRPF4BQ13523 1007 aaKnown RBP9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 ANKS3Q6ZW76 656 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 SPEM1Q8N4L4 309 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 SMARCD2Q92925 531 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 CHFRQ96EP1 664 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 TMEM60Q9H2L4 133 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 CRISPLD1Q9H336 500 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 BRD9Q9H8M2 597 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 POLD4Q9HCU8 107 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 FBXL5Q9UKA1 691 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 GDAQ9Y2T3 454 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 INSL5Q9Y5Q6 135 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 EML5Q05BV3 1969 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 STK36Q9NRP7 1315 aa9.51□□□□□ -0.89
RTFDC1-208ENST00000484084 BAHCC1Q9P281 2608 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 N4BP3O15049 544 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 HOXA6P31267 233 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 LIMK1P53667 647 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 FCHO2Q0JRZ9 810 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 CCINQ13939 588 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 SF3A2Q15428 464 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 ECM1Q16610 540 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 PKN3Q6P5Z2 889 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 PRR23BQ6ZRT6 265 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 LONP2Q86WA8 852 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 TMC8Q8IU68 726 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 MFSD6LQ8IWD5 586 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 SHKBP1Q8TBC3 707 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 ZSCAN18Q8TBC5 510 aaPredicted RBP9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 IRF7Q92985 503 aa9.5□□□□□ -0.89
RTFDC1-208ENST00000484084 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms