RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	CXorf38	Q8TB03	319 aa		29.88	■■■□□ 2.37
TPRA1-208	ENST00000483868	SIX4	Q9UIU6	781 aa		29.88	■■■□□ 2.37
TPRA1-208	ENST00000483868	UBQLN1	Q9UMX0	589 aa	Known RBP	29.88	■■■□□ 2.37
TPRA1-208	ENST00000483868	CHD7	Q9P2D1	2997 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	CDH23	Q9H251	3354 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	CASTOR2	A6NHX0	329 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	AP5Z1	O43299	807 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	VWA3B	Q502W6	1294 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	USP37	Q86T82	979 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	ELMO3	Q96BJ8	720 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	ANKRD36BP1	Q96IX9	119 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	NAP1L5	Q96NT1	182 aa	Predicted RBP	29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	PRO3102	Q9H379	93 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	NDST4	Q9H3R1	872 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	NRDE2	Q9H7Z3	1164 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	DPP3	Q9NY33	737 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	KANSL3	Q9P2N6	904 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	CHD9	Q3L8U1	2897 aa		29.87	■■■□□ 2.37
TPRA1-208	ENST00000483868	LCHN	A4D1U4	455 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	PPEF2	O14830	753 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	CST3	P01034	146 aa	Predicted RBP	29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	AFP	P02771	609 aa	Known RBP	29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	MYOG	P15173	224 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	FMO5	P49326	533 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	FANCC	Q00597	558 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	RNASEL	Q05823	741 aa	Known RBP	29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	DSC1	Q08554	894 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	ZACN	Q401N2	412 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	NT5DC4	Q86YG4	428 aa		29.86	■■■□□ 2.37
TPRA1-208	ENST00000483868	VNN1	O95497	513 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	COLGALT2	Q8IYK4	626 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	BEST2	Q8NFU1	509 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	CACTIN	Q8WUQ7	758 aa	Known RBP	29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	CWH43	Q9H720	699 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	TMEM8A	Q9HCN3	771 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868		F8W810	466 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	PES1	O00541	588 aa	Known RBP	29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	TLL1	O43897	1013 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	ITGB3	P05106	788 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	PBX3	P40426	434 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	BIRC3	Q13489	604 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	BTG3	Q14201	252 aa	Predicted RBP	29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	PTPN21	Q16825	1174 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	LRRC43	Q8N309	656 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	TAS1R2	Q8TE23	839 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	TSPAN18	Q96SJ8	248 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	RAD9A	Q99638	391 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	SLC38A7	Q9NVC3	462 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	INSL6	Q9Y581	213 aa		29.85	■■■□□ 2.37
TPRA1-208	ENST00000483868	TNNC2	P02585	160 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	GTF2H1	P32780	548 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	MXI1	P50539	228 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	CLCNKB	P51801	687 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	TUSC3	Q13454	348 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	ANKRD20A12P	Q8NF67	263 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	SEMA4D	Q92854	862 aa		29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	MRPL9	Q9BYD2	267 aa	Known RBP	29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	29.84	■■■□□ 2.37	1e-18	■■■■■ 447.2
TPRA1-208	ENST00000483868	MRPL42	Q9Y6G3	142 aa	Known RBP	29.84	■■■□□ 2.37
TPRA1-208	ENST00000483868	ZC3H11A	O75152	810 aa	Known RBP eCLIP	29.83	■■■□□ 2.37
TPRA1-208	ENST00000483868	SERPINC1	P01008	464 aa		29.83	■■■□□ 2.37
TPRA1-208	ENST00000483868	KRT39	Q6A163	491 aa		29.83	■■■□□ 2.37
TPRA1-208	ENST00000483868	CMTR2	Q8IYT2	770 aa	Known RBP	29.83	■■■□□ 2.37
TPRA1-208	ENST00000483868	TDH	Q8IZJ6	230 aa		29.83	■■■□□ 2.37
TPRA1-208	ENST00000483868	SCN1A	P35498	2009 aa		29.83	■■■□□ 2.37
TPRA1-208	ENST00000483868	TEX33	O43247	280 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	CYP3A5	P20815	502 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	POLR2B	P30876	1174 aa	Known RBP	29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	CRACR2A	Q9BSW2	395 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	STX10	O60499	249 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	ARHGEF15	O94989	841 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	KRT19	P08727	400 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	LRPAP1	P30533	357 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	AP3M2	P53677	418 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	PLCB2	Q00722	1185 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	C9orf57	Q5W0N0	161 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	C3orf58	Q8NDZ4	430 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	FAM193B	Q96PV7	902 aa	Predicted RBP	29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	AGAP1	Q9UPQ3	857 aa		29.82	■■■□□ 2.36
TPRA1-208	ENST00000483868	GBF1	Q92538	1859 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	ANO9	A1A5B4	782 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	LGALS16	A8MUM7	142 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	PHACTR2	O75167	634 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	LINC00271	P0C7V0	271 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	PBX2	P40425	430 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	MYL7	Q01449	175 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	UPP1	Q16831	310 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	RTN4	Q9NQC3	1192 aa	Known RBP	29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	IFNK	Q9P0W0	207 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868	ITGA11	Q9UKX5	1188 aa		29.81	■■■□□ 2.36
TPRA1-208	ENST00000483868		A0A1B0GTH6	734 aa		29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	NT5C1B-RDH14	C9J2C7	533 aa		29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	XPOT	O43592	962 aa	Known RBP	29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	HLA-DRA	P01903	254 aa		29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	NCOA4	Q13772	614 aa		29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	SP7	Q8TDD2	431 aa	Predicted RBP	29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	PI4K2A	Q9BTU6	479 aa		29.8	■■■□□ 2.36
TPRA1-208	ENST00000483868	PODXL	O00592	558 aa		29.79	■■■□□ 2.36
TPRA1-208	ENST00000483868	PIR	O00625	290 aa		29.79	■■■□□ 2.36
TPRA1-208	ENST00000483868	ITGB1	P05556	798 aa		29.79	■■■□□ 2.36

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms