RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GTF2IRD1Q9UHL9 959 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 CAPN6Q9Y6Q1 641 aa28.18■■■□□ 2.1
SHOX2-204ENST00000483851 MOCS3O95396 460 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 PRKAR2AP13861 404 aaKnown RBP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 CYP11B1P15538 503 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 OSTNP61366 133 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 CBX1P83916 185 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 TFAMQ00059 246 aaKnown RBP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 CAP1Q01518 475 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 TRPC3Q13507 836 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 ARHGEF6Q15052 776 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 GLIPR1L2Q4G1C9 344 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 MAP3K21Q5TCX8 1036 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 SLC27A1Q6PCB7 646 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 EFCAB13Q8IY85 973 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 KLHDC9Q8NEP7 349 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 CALR3Q96L12 384 aaKnown RBP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 ACAP3Q96P50 834 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 PACSIN1Q9BY11 444 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 SALL4Q9UJQ4 1053 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 PCDHGC5Q9Y5F6 944 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 SGPL1O95470 568 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 PGK1P00558 417 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 TMEM253P0C7T8 217 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 HOXA11P31270 313 aaPredicted RBP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 SESTD1Q86VW0 696 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 CEP112Q8N8E3 955 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 GOLGA1Q92805 767 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 OSMRQ99650 979 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 PLEKHA5Q9HAU0 1116 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 APOBEC3GQ9HC16 384 aaKnown RBP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 PCDHB2Q9Y5E7 798 aa28.17■■■□□ 2.1
SHOX2-204ENST00000483851 TRIP12Q14669 1992 aaPredicted RBP28.17■■■□□ 2.1
SHOX2-204ENST00000483851 MROH7Q68CQ1 1323 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 PRLRP16471 622 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 CDR2Q01850 454 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 TMEM62Q0P6H9 643 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 TRIM32Q13049 653 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 SNX17Q15036 470 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 WHAMMP3Q1A5X7 153 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 NOP9Q86U38 636 aaKnown RBP28.16■■■□□ 2.1
SHOX2-204ENST00000483851 RPUSD2Q8IZ73 545 aaKnown RBP28.16■■■□□ 2.1
SHOX2-204ENST00000483851 FAM84AQ96KN4 292 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 ISCUQ9H1K1 167 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 TSKSQ9UJT2 592 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 C2CD2Q9Y426 696 aa28.16■■■□□ 2.1
SHOX2-204ENST00000483851 ANKRD62A6NC57 917 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 LACTBL1A8MY62 500 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 ZRANB2O95218 330 aaKnown RBP eCLIP28.15■■■□□ 2.1
SHOX2-204ENST00000483851 CST3P01034 146 aaPredicted RBP28.15■■■□□ 2.1
SHOX2-204ENST00000483851 CXCL17Q6UXB2 119 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 SLC47A2Q86VL8 602 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 TMEM192Q8IY95 271 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 PCSK9Q8NBP7 692 aaKnown RBP28.15■■■□□ 2.1
SHOX2-204ENST00000483851 CDHR5Q9HBB8 845 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 NUB1Q9Y5A7 615 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 SAR1BQ9Y6B6 198 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 ZSCAN20P17040 1043 aaPredicted RBP28.15■■■□□ 2.1
SHOX2-204ENST00000483851 ACO1P21399 889 aaKnown RBP28.15■■■□□ 2.1
SHOX2-204ENST00000483851 GALCP54803 685 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 NBPF20Q3BBV1 942 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 SLC10A6Q3KNW5 377 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 CD99L2Q8TCZ2 262 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 SLC20A1Q8WUM9 679 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 GINS2Q9Y248 185 aa28.15■■■□□ 2.1
SHOX2-204ENST00000483851 MYH10P35580 1976 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 KRT5P13647 590 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 CHRNB2P17787 502 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 CCND3P30281 292 aaPredicted RBP28.14■■■□□ 2.1
SHOX2-204ENST00000483851 NAP1L1P55209 391 aaKnown RBP28.14■■■□□ 2.1
SHOX2-204ENST00000483851 TUBB4BP68371 445 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 ZNF200P98182 395 aaPredicted RBP28.14■■■□□ 2.1
SHOX2-204ENST00000483851 SPOPLQ6IQ16 392 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 RPAINQ86UA6 219 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 RSPH3Q86UC2 560 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 CTNNBL1Q8WYA6 563 aaPredicted RBP28.14■■■□□ 2.1
SHOX2-204ENST00000483851 NIF3L1Q9GZT8 377 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 DERAQ9Y315 318 aa28.14■■■□□ 2.1
SHOX2-204ENST00000483851 RTN2O75298 545 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 ELNP15502 786 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 PRMT2P55345 433 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 TCEAL1Q15170 157 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 TEX35Q5T0J7 233 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 CCSAPQ6IQ19 270 aaPredicted RBP28.13■■■□□ 2.09
SHOX2-204ENST00000483851 DDX1Q92499 740 aaKnown RBP28.13■■■□□ 2.09
SHOX2-204ENST00000483851 EPC1Q9H2F5 836 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 SEPT11Q9NVA2 429 aaKnown RBP28.13■■■□□ 2.09
SHOX2-204ENST00000483851 ARGLU1Q9NWB6 273 aaPredicted RBP28.13■■■□□ 2.09
SHOX2-204ENST00000483851 NCANO14594 1321 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 THSD7BQ9C0I4 1608 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 CITO14578 2027 aa28.13■■■□□ 2.09
SHOX2-204ENST00000483851 ATP1A1P05023 1023 aaKnown RBP28.12■■■□□ 2.09
SHOX2-204ENST00000483851 ATICP31939 592 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 VEGFBP49765 207 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 MYL6P60660 151 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 ZNF784Q8NCA9 323 aaPredicted RBP28.12■■■□□ 2.09
SHOX2-204ENST00000483851 FMO1Q01740 532 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 JADE1Q6IE81 842 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 UBR7Q8N806 425 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms