RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 TRIM43Q96BQ3 446 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 LMF1Q96S06 567 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 P2RX7Q99572 595 aaKnown RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 PUS3Q9BZE2 481 aaKnown RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 CD244Q9BZW8 370 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 EPN3Q9H201 632 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 IPPKQ9H8X2 491 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 SLC39A2Q9NP94 309 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 ARHGAP20Q9P2F6 1191 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 DSEQ9UL01 958 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 TCAF1Q9Y4C2 921 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 TESMINQ9Y4I5 508 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 COL2A1P02458 1487 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 GRXCR1A8MXD5 290 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 KLF4O43474 513 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 MAFKO60675 156 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 EIF5BO60841 1220 aaKnown RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 FBXO21O94952 628 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ENO2P09104 434 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 GNAT1P11488 350 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 PABPC1P11940 636 aaKnown RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ITGB8P26012 769 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ZEB1P37275 1124 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 RGS2P41220 211 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 KCNQ1P51787 676 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 HMGCS2P54868 508 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 TFF2Q03403 129 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 PABPC4Q13310 644 aaKnown RBP eCLIP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 DDR2Q16832 855 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 TRIM60Q495X7 471 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 EPHA10Q5JZY3 1008 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 AKNAD1Q5T1N1 836 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 MFSD14CQ5VZR4 134 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ANO1Q5XXA6 986 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 Q6ZSN1 163 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ANKS3Q6ZW76 656 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 FUKQ8N0W3 1084 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 GPRC5AQ8NFJ5 357 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 DCAF4Q8WV16 495 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 LPAR1Q92633 364 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 FERMT2Q96AC1 680 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 RUNDC1Q96C34 613 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 TIFAQ96CG3 184 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 NEIL1Q96FI4 390 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 STK31Q9BXU1 1019 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 MYH16Q9H6N6 1097 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 SEC61A2Q9H9S3 476 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 DDX20Q9UHI6 824 aaKnown RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ZFR2Q9UPR6 939 aaKnown RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 TRAF6Q9Y4K3 522 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 DNAH12Q6ZR08 3092 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 MGAMO43451 1857 aa4.41□□□□□ -1.7
LRCH3-217ENST00000483442 DDX60LQ5H9U9 1706 aaKnown RBP4.41□□□□□ -1.7
LRCH3-217ENST00000483442 ECM29Q5VYK3 1845 aa4.4□□□□□ -1.7
LRCH3-217ENST00000483442 DDTLA6NHG4 134 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-217ENST00000483442 FAM90A27PA6NNH2 459 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 NPIPB8E9PQR5 432 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 SMIM22K7EJ46 135 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 MATN2O00339 956 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 DNM1LO00429 736 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 SOD2P04179 222 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 CHGBP05060 677 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 ZNF853P0CG23 659 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 FGFR1P11362 822 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 MAPK4P31152 587 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 ADCYAP1R1P41586 468 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 RGS3P49796 1198 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 GPR85P60893 370 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 GNAI1P63096 354 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 IRX3P78415 501 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-217ENST00000483442 DGCR2P98153 550 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 TLE2Q04725 743 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 HSP90AA2PQ14568 343 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-217ENST00000483442 TBR1Q16650 682 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 KIZQ2M2Z5 673 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 WDR78Q5VTH9 848 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 AGBL4Q5VU57 503 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 KCTD1Q719H9 257 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 GPR142Q7Z601 462 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 USP6NLQ92738 828 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 UIMC1Q96RL1 719 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 AARSD1Q9BTE6 412 aaKnown RBP4.4□□□□□ -1.71
LRCH3-217ENST00000483442 CHMP4AQ9BY43 222 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 PORCNQ9H237 461 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 TXNRD2Q9NNW7 524 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 FLRT1Q9NZU1 646 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 MORF4L1Q9UBU8 362 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 MAST3O60307 1309 aa4.4□□□□□ -1.71
LRCH3-217ENST00000483442 SPEF2Q9C093 1822 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 KBTBD13C9JR72 458 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 H0Y858 1186 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 AGRPO00253 132 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 CYP2C19P33261 490 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 ARID5AQ03989 594 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 FPGSQ05932 587 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 SPIRE1Q08AE8 756 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 FOXE3Q13461 319 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 PICALMQ13492 652 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms