RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 YARSP54577 528 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 ADKP55263 362 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 CCL23P55773 120 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 JAM2P57087 298 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 ZBED6P86452 979 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 CCZ1BP86790 482 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 CCZ1P86791 482 aaPredicted RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 TFAMQ00059 246 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 LRMPQ12912 555 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 TMEM132DQ14C87 1099 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 MEA1Q16626 185 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 PDXDC1Q6P996 788 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 PPFIBP1Q86W92 1011 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 LRRC8AQ8IWT6 810 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 CRIPAKQ8N1N5 446 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 NEK11Q8NG66 645 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 CPLX3Q8WVH0 158 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 LPPQ93052 612 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 FAM212AQ96EL1 285 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 PCMTD1Q96MG8 357 aaPredicted RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 PANX2Q96RD6 677 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 TSPAN18Q96SJ8 248 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 APOL6Q9BWW8 343 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 FTHL17Q9BXU8 183 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 XYLT2Q9H1B5 865 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 APOBEC3GQ9HC16 384 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 ABHD10Q9NUJ1 306 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 RNF19AQ9NV58 838 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 TMEM39AQ9NV64 488 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 KLK14Q9P0G3 267 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 APEX2Q9UBZ4 518 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 PLAGL2Q9UPG8 496 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 DAAM1Q9Y4D1 1078 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 SCN5AQ14524 2016 aa8.9□□□□□ -0.99
USP4-210ENST00000483212 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 LRRC53A6NM62 1247 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 ENPP3O14638 875 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 STAU1O95793 577 aaKnown RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 ASS1P00966 412 aaKnown RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 TIMP1P01033 207 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 TNNC2P02585 160 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 TMEM191BP0C7N4 346 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 SKIP12755 728 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 RFX1P22670 979 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 RFC2P35250 354 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 KRT9P35527 623 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 PIK3CAP42336 1068 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 MYL6P60660 151 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 POLR2FP61218 127 aaKnown RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 SOX4Q06945 474 aaPredicted RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 CETN1Q12798 172 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 BIRC3Q13489 604 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 NCOA4Q13772 614 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 HS1BP3Q53T59 392 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 GLRA4Q5JXX5 417 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 SPOPLQ6IQ16 392 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 WDR59Q6PJI9 974 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 SLC24A5Q71RS6 500 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 CNGA4Q8IV77 575 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 UBR7Q8N806 425 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 SEPT8Q92599 483 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 APBB2Q92870 758 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 KAT5Q92993 513 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 TATDN2Q93075 761 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 C18orf25Q96B23 403 aaPredicted RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 ELMO3Q96BJ8 720 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 KIF12Q96FN5 646 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 ANKRD36BP1Q96IX9 119 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 KREMEN1Q96MU8 473 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 PPP1R10Q96QC0 940 aaKnown RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 PI4K2AQ9BTU6 479 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 C1orf112Q9NSG2 853 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 MIOSQ9NXC5 875 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 TUBGCP4Q9UGJ1 667 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 DNAJC12Q9UKB3 198 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 ITGA11Q9UKX5 1188 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 MYO6Q9UM54 1294 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 GIT1Q9Y2X7 761 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 LUC7L2Q9Y383 392 aaKnown RBP8.89□□□□□ -0.99
USP4-210ENST00000483212 LTBP2Q14767 1821 aa8.89□□□□□ -0.99
USP4-210ENST00000483212 CITO14578 2027 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 COL4A6Q14031 1691 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 ANO9A1A5B4 782 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 ARL5CA6NH57 179 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 F8VZ95 297 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 PPEF2O14830 753 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 OFD1O75665 1012 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 EOMESO95936 686 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 ITGB3P05106 788 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 PTMAP06454 111 aaKnown RBP8.88□□□□□ -0.99
USP4-210ENST00000483212 CYP3A5P20815 502 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 LRPAP1P30533 357 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 MLH1P40692 756 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 GCNT1Q02742 428 aa8.88□□□□□ -0.99
USP4-210ENST00000483212 RRAGAQ7L523 313 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms