RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 COQ9O75208 318 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 KCNA3P22001 575 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 STAT2P52630 851 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 SLC47A2Q86VL8 602 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 FITM2Q8N6M3 262 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 TMEM237Q96Q45 408 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 KCND2Q9NZV8 630 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 NOCTQ9UK39 431 aaKnown RBP13.21□□□□□ -0.3
CCDC78-213ENST00000482878 GJA3Q9Y6H8 435 aa13.21□□□□□ -0.3
CCDC78-213ENST00000482878 TP73O15350 636 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 CYP26A1O43174 497 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 PFDN1O60925 122 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 GGPS1O95749 300 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 POLR2MP0CAP2 368 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 SPOPO43791 374 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 NPR1P16066 1061 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 CREB1P16220 341 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 LBRQ14739 615 aaKnown RBP13.2□□□□□ -0.3
CCDC78-213ENST00000482878 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 B3GNT9Q6UX72 402 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 ZNF564Q8TBZ8 553 aaPredicted RBP13.2□□□□□ -0.3
CCDC78-213ENST00000482878 STK32AQ8WU08 396 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 DTNBP1Q96EV8 351 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 KREMEN1Q96MU8 473 aa13.2□□□□□ -0.3
CCDC78-213ENST00000482878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC78-213ENST00000482878 MTA2O94776 668 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 CETN1Q12798 172 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 NSMFQ6X4W1 530 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 SEPT14Q6ZU15 432 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 ANKRD27Q96NW4 1050 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 AAASQ9NRG9 546 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 FOXO6A8MYZ6 492 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 PTDSS1P48651 473 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 MYBPC2Q14324 1141 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 ZNF568Q3ZCX4 644 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 HOMEZQ8IX15 550 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 FAM71AQ8IYT1 594 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 OPTNQ96CV9 577 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 BICD1Q96G01 975 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 TMEM117Q9H0C3 514 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 STMN4Q9H169 189 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 DNAAF2Q9NVR5 837 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 NVLO15381 856 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 CLDN3O15551 220 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 ACSL3O95573 720 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 DLATP10515 647 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 IMPDH2P12268 514 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 MUTP22033 750 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 TARSP26639 723 aaKnown RBP13.19□□□□□ -0.3
CCDC78-213ENST00000482878 FMO1Q01740 532 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 CEP128Q6ZU80 1094 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 PODNQ7Z5L7 613 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 PPM1KQ8N3J5 372 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 NDNQ99608 321 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 TXLNGQ9NUQ3 528 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 LRRC42Q9Y546 428 aa13.19□□□□□ -0.3
CCDC78-213ENST00000482878 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ATP6V1G1O75348 118 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 GZMAP12544 262 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 RASA3Q14644 834 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CROCCP2Q86T23 111 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 RMDN2Q96LZ7 410 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 TEKT3Q9BXF9 490 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 RXFP1Q9HBX9 757 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 VCX3AQ9NNX9 186 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 GALNT8Q9NY28 637 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CYP39A1Q9NYL5 469 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 P4HA2O15460 535 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ZRSR2Q15696 482 aaKnown RBP13.18□□□□□ -0.3
CCDC78-213ENST00000482878 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms