RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PCDHA3Q9Y5H8 950 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 GYG2O15488 501 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 C21orf2O43822 256 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 CETPP11597 493 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 FOXN2P32314 431 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 FMO1Q01740 532 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 FASTKD3Q14CZ7 662 aaKnown RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 LRRC36Q1X8D7 754 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 SMTNL2Q2TAL5 461 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 APOBEC3HQ6NTF7 200 aaKnown RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 TMEM154Q6P9G4 183 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 USP37Q86T82 979 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 RPS6KC1Q96S38 1066 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 SEL1LQ9UBV2 794 aa13.49□□□□□ -0.25
VPS52-218ENST00000482399 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
VPS52-218ENST00000482399 CCDC195A0A1B0GUA6 201 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 LUC7L3O95232 432 aaKnown RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 GGPS1O95749 300 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 RPA3P35244 121 aaPredicted RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 Q4G0T1 1027 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 PCNX4Q63HM2 1172 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 CCDC62Q6P9F0 684 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 SCARA5Q6ZMJ2 495 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 PYROXD1Q8WU10 500 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 AGBL1Q96MI9 1066 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 RILPQ96NA2 401 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 CPSF2Q9P2I0 782 aaKnown RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 ZBED4O75132 1171 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 ADRB2P07550 413 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 DRG2P55039 364 aaKnown RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
VPS52-218ENST00000482399 BNIP1Q12981 228 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 KIF22Q14807 665 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 ZRSR2Q15696 482 aaKnown RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 NBPF20Q3BBV1 942 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 PARD3BQ8TEW8 1205 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 MAIP1Q8WWC4 291 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 ZNF668Q96K58 619 aaPredicted RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 GPR88Q9GZN0 384 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 MRPL11Q9Y3B7 192 aaKnown RBP13.48□□□□□ -0.25
VPS52-218ENST00000482399 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
VPS52-218ENST00000482399 LIG4P49917 911 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 PEX5P50542 639 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
VPS52-218ENST00000482399 TMEM121Q9BTD3 319 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
VPS52-218ENST00000482399 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
VPS52-218ENST00000482399 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 A0A1W2PPM1 405 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 C2orf71A6NGG8 1288 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 CYP3A4P08684 503 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 CNGA1P29973 690 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 PSEN1P49768 467 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 MAGEB18Q96M61 343 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 TTC1Q99614 292 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 TBC1D10AQ9BXI6 508 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 KCNH7Q9NS40 1196 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 PCSK1NQ9UHG2 260 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 EXOC7Q9UPT5 735 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 GAKO14976 1311 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 TXNDC9O14530 226 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 UNC5CO95185 931 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 ESRRAP11474 423 aaPredicted RBP13.47□□□□□ -0.25
VPS52-218ENST00000482399 SSTR1P30872 391 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 YWHABP31946 246 aaKnown RBP13.47□□□□□ -0.25
VPS52-218ENST00000482399 RHPN2Q8IUC4 686 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 RSAD2Q8WXG1 361 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 SEC14L1Q92503 715 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 BATF3Q9NR55 127 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 NYAP2Q9P242 653 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 UVRAGQ9P2Y5 699 aa13.47□□□□□ -0.25
VPS52-218ENST00000482399 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 LRRIQ4A6NIV6 560 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 DCTN3O75935 186 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 MAP3K6O95382 1288 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 TAC1P20366 129 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 CYP3A7P24462 503 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 RCN1Q15293 331 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 KCNT1Q5JUK3 1230 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 ACAD10Q6JQN1 1059 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 DPY19L2P1Q6NXN4 242 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 FOXR2Q6PJQ5 311 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 SV2AQ7L0J3 742 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 NLRP9Q7RTR0 991 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 LDHDQ86WU2 507 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 CCDC125Q86Z20 511 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 HERPUD2Q9BSE4 406 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 DCLK3Q9C098 648 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 ARMCX1Q9P291 453 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 KAT6AQ92794 2004 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 CCDC160A6NGH7 325 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 F5H423 210 aaPredicted RBP13.46□□□□□ -0.25
VPS52-218ENST00000482399 PECAM1P16284 738 aaPredicted RBP13.46□□□□□ -0.25
VPS52-218ENST00000482399 QARSP47897 775 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms