RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 DGKKQ5KSL6 1271 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 MFSD6LQ8IWD5 586 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 TPH2Q8IWU9 490 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 YAF2Q8IY57 180 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 TRIM22Q8IYM9 498 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 ELMOD1Q8N336 334 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 KDF1Q8NAX2 398 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-224ENST00000481929 DAGLBQ8NCG7 672 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 FAM200AQ8TCP9 573 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 ZSWIM3Q96MP5 696 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-224ENST00000481929 TRPV4Q9HBA0 871 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 CYP4F11Q9HBI6 524 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 SPAG17Q6Q759 2223 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 SLC38A8A6NNN8 435 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 ARNTLO00327 626 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 TBX3O15119 743 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 ABLIM3O94929 683 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
HDAC6-224ENST00000481929 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 SLC8B1Q6J4K2 584 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 TCEAL8Q8IYN2 117 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 ZSCAN18Q8TBC5 510 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-224ENST00000481929 E2F7Q96AV8 911 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 ADPGKQ9BRR6 497 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 CXCL16Q9H2A7 254 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 PDZD7Q9H5P4 517 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
HDAC6-224ENST00000481929 TMEM8BA6NDV4 472 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 HEPACAM2A8MVW5 462 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 RPP40O75818 363 aaKnown RBP16.49■□□□□ 0.23
HDAC6-224ENST00000481929 ATF2P15336 505 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 RAP1GAPP47736 663 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 SOX9P48436 509 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 NOVA1P51513 510 aaKnown RBP16.49■□□□□ 0.23
HDAC6-224ENST00000481929 ARPP19P56211 112 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 CCT2P78371 535 aaKnown RBP16.49■□□□□ 0.23
HDAC6-224ENST00000481929 RNF43Q68DV7 783 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 GALNT17Q6IS24 598 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 ZBTB8OSQ8IWT0 167 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 GAB3Q8WWW8 586 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 HAS1Q92839 578 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 UROC1Q96N76 676 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 SLITRK6Q9H5Y7 841 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
HDAC6-224ENST00000481929 ANKEF1Q9NU02 776 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 C2orf42Q9NWW7 574 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 PCDHGA5Q9Y5G8 931 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 SPEGQ15772 3267 aa16.49■□□□□ 0.23
HDAC6-224ENST00000481929 NCANO14594 1321 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 I3L4J1 428 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 CHADO15335 359 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 PRKCBP05771 671 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 CCDC192P0DO97 292 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 MYL4P12829 197 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 IGFBP6P24592 240 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-224ENST00000481929 BRCC3P46736 316 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 CLCNKBP51801 687 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
HDAC6-224ENST00000481929 FOXC1Q12948 553 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 NPY5RQ15761 445 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 FAM187BQ17R55 369 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 GLRA4Q5JXX5 417 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 PLA2G2CQ5R387 149 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 KBTBD6Q86V97 674 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 NOSTRINQ8IVI9 506 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 LEMD2Q8NC56 503 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 ZNF512Q96ME7 567 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-224ENST00000481929 SMOC1Q9H4F8 434 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 ASAH2Q9NR71 780 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 ASPMQ8IZT6 3477 aa16.48■□□□□ 0.23
HDAC6-224ENST00000481929 PDCD11Q14690 1871 aaKnown RBP16.48■□□□□ 0.23
HDAC6-224ENST00000481929 MYBPHLA2RUH7 354 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 SOBPA7XYQ1 873 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 SPECC1L-ADORA2AF8WAN1 911 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 CCNT1O60563 726 aaKnown RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 MOSPD3O75425 235 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 SLITRK3O94933 977 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 LYPLA2O95372 231 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 DEXIO95424 95 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 SEC24AO95486 1093 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 GJA1P17302 382 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 HOXC13P31276 330 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 CTHP32929 405 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 MPLP40238 635 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 ZNF252P-AS1Q0IIN9 211 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 PRPF4BQ13523 1007 aaKnown RBP16.47■□□□□ 0.23
HDAC6-224ENST00000481929 UPP1Q16831 310 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
HDAC6-224ENST00000481929 TXNDC11Q6PKC3 985 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms