RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 KIFC1Q9BW19 673 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 TTC41PQ6P2S7 1318 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 GGCXP38435 758 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 UAP1L1Q3KQV9 507 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 BMP2KLQ5H9B9 411 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 MARK2Q7KZI7 788 aaKnown RBP12.16□□□□□ -0.46
TRIM27-205ENST00000481474 LIMA1Q9UHB6 759 aaKnown RBP12.16□□□□□ -0.46
TRIM27-205ENST00000481474 APOBEC2Q9Y235 224 aaKnown RBP12.16□□□□□ -0.46
TRIM27-205ENST00000481474 SEPT4O43236 478 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 KCNQ3O43525 872 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 TNFAIP2Q03169 654 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 FANCBQ8NB91 859 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 IPMKQ8NFU5 416 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 PUS3Q9BZE2 481 aaKnown RBP12.16□□□□□ -0.46
TRIM27-205ENST00000481474 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 KANSL2Q9H9L4 492 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 ASNSD1Q9NWL6 643 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 TMCC3Q9ULS5 477 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 ADCY9O60503 1353 aa12.16□□□□□ -0.46
TRIM27-205ENST00000481474 USP17L10C9JJH3 530 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 TSPAN9O75954 239 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 TCEAL5Q5H9L2 206 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 OTOAQ7RTW8 1153 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 TRMT11Q7Z4G4 463 aaKnown RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 ANKRD44Q8N8A2 993 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 IP6K1Q92551 441 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 MSRAQ9UJ68 235 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 MEI4A8MW99 385 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SDC4P31431 198 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 MRPS35P82673 323 aaKnown RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 PRKAA1Q13131 559 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 EDRF1Q3B7T1 1238 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 UCMAQ8WVF2 138 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 TADA1Q96BN2 335 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 CAPS2Q9BXY5 557 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 STK33Q9BYT3 514 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 XPO4Q9C0E2 1151 aaKnown RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SH3BGRL2Q9UJC5 107 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 PLA2G4BP0C869 781 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 ARF3P61204 181 aaPredicted RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 ARF1P84077 181 aaKnown RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 CENPUQ71F23 418 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SCAIQ8N9R8 606 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 CCDC151A5D8V7 595 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 NFIBO00712 420 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 TADA3O75528 432 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 OR6A2O95222 327 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 PRIM2P49643 509 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 FCGRTP55899 365 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 C21orf59P57076 290 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SREBF2Q12772 1141 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 ARMC4Q5T2S8 1044 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 RSPH1Q8WYR4 309 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 GSSP48637 474 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 C1orf146Q5VVC0 180 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
TRIM27-205ENST00000481474 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
TRIM27-205ENST00000481474 PDIK1LQ8N165 341 aa12.15□□□□□ -0.47
TRIM27-205ENST00000481474 REXO5Q96IC2 774 aaKnown RBP12.15□□□□□ -0.47
TRIM27-205ENST00000481474 CLIC4Q9Y696 253 aa12.15□□□□□ -0.47
TRIM27-205ENST00000481474 ARHGEF11O15085 1522 aa12.15□□□□□ -0.47
TRIM27-205ENST00000481474 NDUFV1P49821 464 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 TSC22D3Q99576 134 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 TJP3O95049 919 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 PACS1Q6VY07 963 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 ATPAF2Q8N5M1 289 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 PPP1R13LQ8WUF5 828 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 TMEM143Q96AN5 459 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 SPTLC3Q9NUV7 552 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 STAP1Q9ULZ2 295 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 CCDC185Q8N715 623 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 GAS2L1Q99501 681 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 GULP1Q9UBP9 304 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 KCNN4O15554 427 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 VCLP18206 1134 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 STAT3P40763 770 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 SH3RF3Q8TEJ3 882 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 PIGKQ92643 395 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 MASTLQ96GX5 879 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 ACOX2Q99424 681 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 OLFM1Q99784 485 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 AFF2P51816 1311 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 STRNO43815 780 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms