RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 PABPC1LQ4VXU2 614 aaKnown RBP16.66■□□□□ 0.26
LIMS3-203ENST00000480744 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
LIMS3-203ENST00000480744 PARM1Q6UWI2 310 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 DTWD2Q8NBA8 298 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 ING5Q8WYH8 240 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 FGF13Q92913 245 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 FGF14Q92915 247 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
LIMS3-203ENST00000480744 TBC1D17Q9HA65 648 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 KCND2Q9NZV8 630 aa16.66■□□□□ 0.26
LIMS3-203ENST00000480744 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.66■□□□□ 0.26
LIMS3-203ENST00000480744 PRRG1O14668 218 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 CLDN3O15551 220 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
LIMS3-203ENST00000480744 ELF1P32519 619 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
LIMS3-203ENST00000480744 MCM4P33991 863 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 UBA7P41226 1012 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 ROR1Q01973 937 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 ZPBP2Q6X784 338 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 FRMD5Q7Z6J6 570 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 GPBP1Q86WP2 473 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 KCTD17Q8N5Z5 321 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 CALML4Q96GE6 196 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 ARHGEF3Q9NR81 526 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 LARSQ9P2J5 1176 aaKnown RBP16.65■□□□□ 0.26
LIMS3-203ENST00000480744 DNMT3BQ9UBC3 853 aaKnown RBP16.65■□□□□ 0.26
LIMS3-203ENST00000480744 ANK1P16157 1881 aa16.65■□□□□ 0.26
LIMS3-203ENST00000480744 H0YCG3 227 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 H7C4K7 107 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 SYN3O14994 580 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 LRG1P02750 347 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.25
LIMS3-203ENST00000480744 POU2F2P09086 479 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 CXCL8P10145 99 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 SPAG1Q07617 926 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 ANGPT1Q15389 498 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 SLC10A6Q3KNW5 377 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 ARSHQ5FYA8 562 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 SPECC1Q5M775 1068 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 MTSS1LQ765P7 747 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 HAUS6Q7Z4H7 955 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 AK8Q96MA6 479 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 KXD1Q9BQD3 176 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 REEP2Q9BRK0 252 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 TUBGCP4Q9UGJ1 667 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 MRPS23Q9Y3D9 190 aaKnown RBP16.64■□□□□ 0.25
LIMS3-203ENST00000480744 USP34Q70CQ2 3546 aa16.64■□□□□ 0.25
LIMS3-203ENST00000480744 WDR27A2RRH5 827 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 K7ENM7 598 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 FAM13AO94988 1023 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 NBL1P41271 181 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 LIG4P49917 911 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 NCKAP1LP55160 1127 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 GPC5P78333 572 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 MCL1Q07820 350 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 CTXN3Q4LDR2 81 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 SLC8B1Q6J4K2 584 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 NPAS3Q8IXF0 933 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 TMEM130Q8N3G9 435 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 MYCT1Q8N699 235 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 ZNF461Q8TAF7 563 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 SLC2A4RGQ9NR83 387 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 FBXL5Q9UKA1 691 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
LIMS3-203ENST00000480744 VPS37CA5D8V6 355 aaPredicted RBP16.62■□□□□ 0.25
LIMS3-203ENST00000480744 PROB1E7EW31 1015 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
LIMS3-203ENST00000480744 DCNP07585 359 aaKnown RBP16.62■□□□□ 0.25
LIMS3-203ENST00000480744 RHOP08100 348 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 CLTAP09496 248 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 PLCG1P19174 1290 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 MCM6Q14566 821 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
LIMS3-203ENST00000480744 ZNF280DQ6N043 979 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 RTL10Q7L3V2 364 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 ASCL5Q7RTU5 278 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 APPL2Q8NEU8 664 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 MCRS1Q96EZ8 462 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 KIF12Q96FN5 646 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 SUSD3Q96L08 255 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 ODF2LQ9ULJ1 636 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 COL4A3Q01955 1670 aa16.62■□□□□ 0.25
LIMS3-203ENST00000480744 TCHHQ07283 1943 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 ARHGEF37A1IGU5 675 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 PRR23AA6NEV1 266 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 SLC26A4O43511 780 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 TBCAO75347 108 aaKnown RBP16.61■□□□□ 0.25
LIMS3-203ENST00000480744 ABLIM3O94929 683 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 BMP15O95972 392 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 CPB1P15086 417 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 PTPN2P17706 415 aa16.61■□□□□ 0.25
LIMS3-203ENST00000480744 MARCKSP29966 332 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms