RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 MTMR12Q9C0I1 747 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
ABCF3-213ENST00000480539 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 DMAC2Q9NW81 257 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 LMCD1Q9NZU5 365 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 CTNND2Q9UQB3 1225 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 DERAQ9Y315 318 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 C2CD2Q9Y426 696 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 SF3B1O75533 1304 aaKnown RBP eCLIP16.41■□□□□ 0.22
ABCF3-213ENST00000480539 PTPRJQ12913 1337 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-213ENST00000480539 TMEM189-UBE2V1I3L0A0 370 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 PSMA7O14818 248 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 SOD2P04179 222 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 POU3F3P20264 500 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-213ENST00000480539 CYP3A5P20815 502 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 BRCC3P46736 316 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 PMS1P54277 932 aaKnown RBP16.4■□□□□ 0.22
ABCF3-213ENST00000480539 POU5F1Q01860 360 aaKnown RBP16.4■□□□□ 0.22
ABCF3-213ENST00000480539 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 SPATA1Q5VX52 437 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 CEP135Q66GS9 1140 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 TAS1R1Q7RTX1 841 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 SLC9A9Q8IVB4 645 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 EEF2KMTQ96G04 330 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 TSG101Q99816 390 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 GPR62Q9BZJ7 368 aa16.4■□□□□ 0.22
ABCF3-213ENST00000480539 HIDE1A8MVS5 230 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 I3L4J1 428 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 C2CD2LO14523 706 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 TMEM191BP0C7N4 346 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
ABCF3-213ENST00000480539 LRPAP1P30533 357 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
ABCF3-213ENST00000480539 PSMD6Q15008 389 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 NFIL3Q16649 462 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 CD300LGQ6UXG3 332 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 RNF168Q8IYW5 571 aaPredicted RBP16.39■□□□□ 0.21
ABCF3-213ENST00000480539 TRIML1Q8N9V2 468 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 CCDC127Q96BQ5 260 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 DDX27Q96GQ7 796 aaKnown RBP16.39■□□□□ 0.21
ABCF3-213ENST00000480539 TSPAN18Q96SJ8 248 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 CGRRF1Q99675 332 aa16.39■□□□□ 0.21
ABCF3-213ENST00000480539 EYSQ5T1H1 3165 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 EFEMP2O95967 443 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 URODP06132 367 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 CTSAP10619 480 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 CCNE1P24864 410 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 RPL9P32969 192 aaKnown RBP16.38■□□□□ 0.21
ABCF3-213ENST00000480539 NRIP1P48552 1158 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 GLUD2P49448 558 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 SKIV2LQ15477 1246 aaKnown RBP16.38■□□□□ 0.21
ABCF3-213ENST00000480539 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 EDRF1Q3B7T1 1238 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 C9orf57Q5W0N0 161 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 ANKRD40Q6AI12 368 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 CENPPQ6IPU0 288 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 DCLRE1AQ6PJP8 1040 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 RBM23Q86U06 439 aaKnown RBP16.38■□□□□ 0.21
ABCF3-213ENST00000480539 OR5B17Q8NGF7 314 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 PLEKHO2Q8TD55 490 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 NELFBQ8WX92 580 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 ANKRD36BP1Q96IX9 119 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 FNBP1Q96RU3 617 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
ABCF3-213ENST00000480539 NGRNQ9NPE2 291 aaKnown RBP16.38■□□□□ 0.21
ABCF3-213ENST00000480539 DPP3Q9NY33 737 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 FRMD4BQ9Y2L6 1034 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 NUB1Q9Y5A7 615 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 MYO9BQ13459 2157 aa16.38■□□□□ 0.21
ABCF3-213ENST00000480539 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 AKAP3O75969 853 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 ITGB3P05106 788 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 TKTP29401 623 aaKnown RBP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 PPP1R2P41236 205 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 STX17P56962 302 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 HYAL1Q12794 435 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 PAK1Q13153 545 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 ADAM9Q13443 819 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 SURF1Q15526 300 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 CCDC183Q5T5S1 534 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 FAM171A1Q5VUB5 890 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 CEP57Q86XR8 500 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 NT5DC4Q86YG4 428 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 WDR49Q8IV35 697 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 FAM186BQ8IYM0 893 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 C1orf127Q8N9H9 656 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 TMEM174Q8WUU8 243 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 DHTKD1Q96HY7 919 aaPredicted RBP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 MFSD14AQ96MC6 490 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 INTS13Q9NVM9 706 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 STK39Q9UEW8 545 aa16.37■□□□□ 0.21
ABCF3-213ENST00000480539 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
ABCF3-213ENST00000480539 ANO9A1A5B4 782 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms