RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 MYL5Q02045 173 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 SURF1Q15526 300 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 NOMO2Q5JPE7 1267 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 CDKAL1Q5VV42 579 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 INTS8Q75QN2 995 aaKnown RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 TMCO2Q7Z6W1 182 aaPredicted RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 NT5DC4Q86YG4 428 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 TRIM59Q8IWR1 403 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 AOPEPQ8N6M6 819 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 FAM200AQ8TCP9 573 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 HELQQ8TDG4 1101 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 ZFP42Q96MM3 310 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 SLC9A7Q96T83 725 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 POP1Q99575 1024 aaKnown RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 MTIF3Q9H2K0 278 aaKnown RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 METTL14Q9HCE5 456 aaKnown RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 TOPORSQ9NS56 1045 aaPredicted RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 RBAKQ9NYW8 714 aaPredicted RBP10.4□□□□□ -0.74
CD46-214ENST00000480003 PLAGL2Q9UPG8 496 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 DERAQ9Y315 318 aa10.4□□□□□ -0.74
CD46-214ENST00000480003 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 LRRIQ3A6PVS8 624 aaPredicted RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 PMM2O15305 246 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 C4BPAP04003 597 aaKnown RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 THP07101 528 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 ATP2A2P16615 1042 aaKnown RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 CYP3A5P20815 502 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 SCNN1GP51170 649 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 VAMP7P51809 220 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 DLG4P78352 724 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 DSC1Q08554 894 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 TPD52L1Q16890 204 aaPredicted RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 SCARA3Q6AZY7 606 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 JADE1Q6IE81 842 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 GLB1LQ6UWU2 654 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 LUZP1Q86V48 1076 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 HERC6Q8IVU3 1022 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 EFCAB13Q8IY85 973 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 RNF169Q8NCN4 708 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 CXorf38Q8TB03 319 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 RAD9AQ99638 391 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 CWH43Q9H720 699 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 TBC1D13Q9NVG8 400 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 INTS13Q9NVM9 706 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 ARMCX3Q9UH62 379 aaPredicted RBP10.39□□□□□ -0.75
CD46-214ENST00000480003 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 INSL6Q9Y581 213 aa10.39□□□□□ -0.75
CD46-214ENST00000480003 TBKBP1A7MCY6 615 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 GRXCR1A8MXD5 290 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 DDHD2O94830 711 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 POMCP01189 267 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 LINC00271P0C7V0 271 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 IBSPP21815 317 aaPredicted RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 DNAJB2P25686 324 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 GTF2H1P32780 548 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 MLH1P40692 756 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 AP3M2P53677 418 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 PPP2R3AQ06190 1150 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 SOX4Q06945 474 aaPredicted RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 SPAG1Q07617 926 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 PPP3CAQ08209 521 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 BFSP1Q12934 665 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 DUOXA2Q1HG44 320 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 TCP11X2Q5H9J9 407 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 FAM117BQ6P1L5 589 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 CD300LGQ6UXG3 332 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 APTXQ7Z2E3 356 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 ZNF280BQ86YH2 543 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 WDR49Q8IV35 697 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 FAM114A1Q8IWE2 563 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 COLGALT2Q8IYK4 626 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 CMTR2Q8IYT2 770 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 TDHQ8IZJ6 230 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 OR5B17Q8NGF7 314 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 CACTINQ8WUQ7 758 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 SLC35C1Q96A29 364 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 CNOT6LQ96LI5 555 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 RNPC3Q96LT9 517 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 FNBP1Q96RU3 617 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 CGRRF1Q99675 332 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 RBSNQ9H1K0 784 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 NRDE2Q9H7Z3 1164 aa10.38□□□□□ -0.75
CD46-214ENST00000480003 LIMA1Q9UHB6 759 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 UBQLN1Q9UMX0 589 aaKnown RBP10.38□□□□□ -0.75
CD46-214ENST00000480003 PTPRJQ12913 1337 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 ANO9A1A5B4 782 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 BECN2A8MW95 431 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 KCNJ18B7U540 433 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 PIRO00625 290 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 B4GALT3O60512 393 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 CST3P01034 146 aaPredicted RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 ALDH2P05091 517 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 GALTP07902 379 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 NFICP08651 508 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 DLATP10515 647 aaKnown RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 KRT13P13646 458 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms