RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 DMXL1Q9Y485 3027 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 LAD1O00515 517 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 MAN2B1O00754 1011 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 DTNBO60941 627 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 MCF2P10911 925 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 TKTP29401 623 aaKnown RBP14.59□□□□□ -0.07
ABCF1-206ENST00000479542 ELF1P32519 619 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
ABCF1-206ENST00000479542 ROR1Q01973 937 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 ADCY1Q08828 1119 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 FZD5Q13467 585 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 PRSS36Q5K4E3 855 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 VARS2Q5ST30 1063 aaKnown RBP14.59□□□□□ -0.07
ABCF1-206ENST00000479542 ZNF852Q6ZMS4 543 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 C3orf58Q8NDZ4 430 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 C8orf76Q96K31 380 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 OXCT2Q9BYC2 517 aaPredicted RBP14.59□□□□□ -0.07
ABCF1-206ENST00000479542 MRPL4Q9BYD3 311 aaKnown RBP14.59□□□□□ -0.07
ABCF1-206ENST00000479542 TRPV4Q9HBA0 871 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 HCFC1R1Q9NWW0 138 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 CNTN3Q9P232 1028 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
ABCF1-206ENST00000479542 LRG1P02750 347 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.085e-7■■■□□ 19.1
ABCF1-206ENST00000479542 CCT6AP40227 531 aaKnown RBP14.58□□□□□ -0.08
ABCF1-206ENST00000479542 NPTX2P47972 431 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 EPHA5P54756 1037 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 ST3GAL1Q11201 340 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 UBXN2BQ14CS0 331 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 ZNF174Q15697 407 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 ECM1Q16610 540 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 TTC38Q5R3I4 469 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 DGLUCYQ7Z3D6 616 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 KIAA2013Q8IYS2 634 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 ZNF687Q8N1G0 1237 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 ATRIPQ8WXE1 791 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 SUSD3Q96L08 255 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 DRC1Q96MC2 740 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 ACAP3Q96P50 834 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 TSPAN18Q96SJ8 248 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 GPR88Q9GZN0 384 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 CDT1Q9H211 546 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 EPC1Q9H2F5 836 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 PRMT8Q9NR22 394 aaPredicted RBP14.58□□□□□ -0.08
ABCF1-206ENST00000479542 SPATA6Q9NWH7 488 aaPredicted RBP14.58□□□□□ -0.08
ABCF1-206ENST00000479542 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 KIAA1024Q9UPX6 916 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 DNM3Q9UQ16 869 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.08
ABCF1-206ENST00000479542 FRYLO94915 3013 aa14.58□□□□□ -0.08
ABCF1-206ENST00000479542 TRIP11Q15643 1979 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 WDR27A2RRH5 827 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 SHISA7A6NL88 538 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 PODXLO00592 558 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 ABLIM1O14639 778 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 LRRN2O75325 713 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 IGFBP6P24592 240 aaPredicted RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 TARSP26639 723 aaKnown RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 PRPHP41219 470 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 BRCC3P46736 316 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 NRLP54845 237 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 SOX4Q06945 474 aaPredicted RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 DMP1Q13316 513 aaPredicted RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 SLC5A9Q2M3M2 681 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 GLRA4Q5JXX5 417 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 C1orf228Q6PIY5 440 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 MAP4K3Q8IVH8 894 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 DAW1Q8N136 415 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 APPL2Q8NEU8 664 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 SECISBP2LQ93073 1101 aaKnown RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 KXD1Q9BQD3 176 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 AFF4Q9UHB7 1163 aaKnown RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 NOL7Q9UMY1 257 aaKnown RBP14.57□□□□□ -0.08
ABCF1-206ENST00000479542 USP20Q9Y2K6 914 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 F5P12259 2224 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 PATJQ8NI35 1801 aa14.57□□□□□ -0.08
ABCF1-206ENST00000479542 GPR179Q6PRD1 2367 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 CEP250Q9BV73 2442 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 PRR5-ARHGAP8B1AHC4 643 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 SCP2P22307 547 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 PAX3P23760 479 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 FCARP24071 287 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 GUCY2CP25092 1073 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 PEX3P56589 373 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 ARHGAP8P85298 464 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 TANGO2Q6ICL3 276 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 POTEHQ6S545 545 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 MPZL3Q6UWV2 235 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 C1orf186Q6ZWK4 172 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 TAS1R3Q7RTX0 852 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 DEPDC1BQ8WUY9 529 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 SPIRE2Q8WWL2 714 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 IRF7Q92985 503 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 MCRS1Q96EZ8 462 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 MSANTD3Q96H12 275 aa14.56□□□□□ -0.08
ABCF1-206ENST00000479542 ZSCAN31Q96LW9 406 aaPredicted RBP14.56□□□□□ -0.08
ABCF1-206ENST00000479542 ZMAT2Q96NC0 199 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms