RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CYP4A22Q5TCH4 519 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 VITQ6UXI7 678 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 MAP4K3Q8IVH8 894 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 DEPTORQ8TB45 409 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 OXER1Q8TDS5 423 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 SMARCD2Q92925 531 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 PPP1R10Q96QC0 940 aaKnown RBP17.72■□□□□ 0.43
DDX56-210ENST00000479440 TTC12Q9H892 705 aaPredicted RBP17.72■□□□□ 0.43
DDX56-210ENST00000479440 CYP4F11Q9HBI6 524 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 ANGPTL2Q9UKU9 493 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 TPRP12270 2363 aaKnown RBP17.71■□□□□ 0.43
DDX56-210ENST00000479440 WDR27A2RRH5 827 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 TTLL13PA6NNM8 815 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 ACKR2O00590 384 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 ZNF263O14978 683 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 NEMFO60524 1076 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 ATF2P15336 505 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 LIG1P18858 919 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 ATP2B1P20020 1258 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 KRT2P35908 639 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 NAMPTP43490 491 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 IL31Q6EBC2 164 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 CENPQQ7L2Z9 268 aaPredicted RBP17.71■□□□□ 0.43
DDX56-210ENST00000479440 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 SKAP1Q86WV1 359 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 SPEM1Q8N4L4 309 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 LEMD2Q8NC56 503 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 TCEAL4Q96EI5 215 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 CXCL16Q9H2A7 254 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 INSL5Q9Y5Q6 135 aa17.71■□□□□ 0.43
DDX56-210ENST00000479440 H7C4K7 107 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 ABLIM3O94929 683 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 PAPSS2O95340 614 aaPredicted RBP17.7■□□□□ 0.42
DDX56-210ENST00000479440 CHRNB1P11230 501 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 BRCC3P46736 316 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 PTGDRQ13258 359 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 EARS2Q5JPH6 523 aaKnown RBP17.7■□□□□ 0.42
DDX56-210ENST00000479440 POTEHQ6S545 545 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 TCEAL8Q8IYN2 117 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 CSGALNACT1Q8TDX6 532 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 WASF1Q92558 559 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 CCDC113Q9H0I3 377 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
DDX56-210ENST00000479440 TICRRQ7Z2Z1 1910 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 CHURC1-FNTBB4DL54 471 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 I3L4J1 428 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 SYN3O14994 580 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 CCNE1P24864 410 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 FNTBP49356 437 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
DDX56-210ENST00000479440 MLLT6P55198 1093 aaPredicted RBP17.69■□□□□ 0.42
DDX56-210ENST00000479440 ARPP19P56211 112 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 SCRN1Q12765 414 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 AASDHQ4L235 1098 aaPredicted RBP17.69■□□□□ 0.42
DDX56-210ENST00000479440 TPGS2Q68CL5 300 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 YAF2Q8IY57 180 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 C3orf58Q8NDZ4 430 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 E2F7Q96AV8 911 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
DDX56-210ENST00000479440 TRPV4Q9HBA0 871 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 TUFT1Q9NNX1 390 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 ASAH2Q9NR71 780 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
DDX56-210ENST00000479440 SLC38A7Q9NVC3 462 aa17.69■□□□□ 0.42
DDX56-210ENST00000479440 FAM205CA6NFA0 338 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 GDF9O60383 454 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 CCR2P41597 374 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 TXKP42681 527 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 NR5A1Q13285 461 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 ATF7IP2Q5U623 682 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 EEF1DP3Q658K8 133 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 CD300LGQ6UXG3 332 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 CEP68Q76N32 757 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 C12orf50Q8NA57 414 aaPredicted RBP17.68■□□□□ 0.42
DDX56-210ENST00000479440 ZSCAN18Q8TBC5 510 aaPredicted RBP17.68■□□□□ 0.42
DDX56-210ENST00000479440 BSNDQ8WZ55 320 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 ZNF512Q96ME7 567 aaPredicted RBP17.68■□□□□ 0.42
DDX56-210ENST00000479440 SLITRK6Q9H5Y7 841 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 C8orf33Q9H7E9 229 aaPredicted RBP17.68■□□□□ 0.42
DDX56-210ENST00000479440 GJB4Q9NTQ9 266 aa17.68■□□□□ 0.42
DDX56-210ENST00000479440 PODXLO00592 558 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 EPB41L2O43491 1005 aaKnown RBP17.67■□□□□ 0.42
DDX56-210ENST00000479440 HRO43593 1189 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 EDN1P05305 212 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 PMLP29590 882 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 EFNA5P52803 228 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 LIMK1P53667 647 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 TWF1Q12792 350 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 GAS6Q14393 721 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 ZNF280DQ6N043 979 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 MFSD6LQ8IWD5 586 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 IFT74Q96LB3 600 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
DDX56-210ENST00000479440 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 GPR88Q9GZN0 384 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 AFF4Q9UHB7 1163 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms