RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 PDLIM2Q96JY6 352 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 PAAF1Q9BRP4 392 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 PI4K2AQ9BTU6 479 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 XYLT2Q9H1B5 865 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 PRKAG2Q9UGJ0 569 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 CITO14578 2027 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 ANO9A1A5B4 782 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 PES1O00541 588 aaKnown RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 P4HA2O15460 535 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 CBFA2T2O43439 604 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 DDHD2O94830 711 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 ITGB3P05106 788 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 TMEM191BP0C7N4 346 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 CDC25BP30305 580 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 TBX2Q13207 712 aaPredicted RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 HSP90AA2PQ14568 343 aaPredicted RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 DUOXA2Q1HG44 320 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 FILIP1LQ4L180 1135 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 RASIP1Q5U651 963 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 TRIM65Q6PJ69 517 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 NT5DC4Q86YG4 428 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 ZNF280BQ86YH2 543 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 RPUSD2Q8IZ73 545 aaKnown RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 EHBP1Q8NDI1 1231 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 C3orf58Q8NDZ4 430 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 KAT5Q92993 513 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 TOP1MTQ969P6 601 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 LSM14BQ9BX40 385 aaKnown RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■■■■■ 96.1
CHD3-210ENST00000479080 TBC1D13Q9NVG8 400 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 UBQLN1Q9UMX0 589 aaKnown RBP14.15□□□□□ -0.14
CHD3-210ENST00000479080 INPP5FQ9Y2H2 1132 aa14.15□□□□□ -0.14
CHD3-210ENST00000479080 ITIH6Q6UXX5 1313 aa14.15□□□□□ -0.15
CHD3-210ENST00000479080 TRIP11Q15643 1979 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 F8W810 466 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 SPTLC1O15269 473 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 STX10O60499 249 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 N4BP1O75113 896 aaKnown RBP14.14□□□□□ -0.15
CHD3-210ENST00000479080 DGKIO75912 1065 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 BAIAP3O94812 1187 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 FGBP02675 491 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 LRPAP1P30533 357 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 POLR2BP30876 1174 aaKnown RBP14.14□□□□□ -0.15
CHD3-210ENST00000479080 MAGEA10P43363 369 aaPredicted RBP14.14□□□□□ -0.15
CHD3-210ENST00000479080 AP3M2P53677 418 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 MYL6P60660 151 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 MLLT1Q03111 559 aaPredicted RBP14.14□□□□□ -0.15
CHD3-210ENST00000479080 DSC1Q08554 894 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 GOLGA8FQ08AF8 430 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 GOLGA8DPQ0D2H9 430 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 GRIK3Q13003 919 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 BIRC3Q13489 604 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 NCOA4Q13772 614 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 NOMO2Q5JPE7 1267 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 C9orf50Q5SZB4 431 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 TMC6Q7Z403 805 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 HACE1Q8IYU2 909 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 FBXL13Q8NEE6 735 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 HERVK_113Q902F9 699 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 RABGGTAQ92696 567 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 TATDN2Q93075 761 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 ZNF689Q96CS4 500 aaPredicted RBP14.14□□□□□ -0.15
CHD3-210ENST00000479080 ANKRD36BP1Q96IX9 119 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 NAA15Q9BXJ9 866 aaKnown RBP14.14□□□□□ -0.15
CHD3-210ENST00000479080 RAB20Q9NX57 234 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 DPP3Q9NY33 737 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 PCDHB7Q9Y5E2 793 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 FHOD1Q9Y613 1164 aa14.14□□□□□ -0.15
CHD3-210ENST00000479080 PIRO00625 290 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 UPP2O95045 317 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 ASS1P00966 412 aaKnown RBP14.13□□□□□ -0.15
CHD3-210ENST00000479080 TNNC2P02585 160 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 GYPCP04921 128 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 CYP3A5P20815 502 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 PIK3CAP42336 1068 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 FKBP15Q5T1M5 1219 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 C9orf57Q5W0N0 161 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 PSRC1Q6PGN9 363 aaPredicted RBP14.13□□□□□ -0.15
CHD3-210ENST00000479080 USP37Q86T82 979 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 BAP1Q92560 729 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 KREMEN1Q96MU8 473 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 RPS6KC1Q96S38 1066 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 GPR88Q9GZN0 384 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 UBN1Q9NPG3 1134 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 PLCB1Q9NQ66 1216 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 DNAJB4Q9UDY4 337 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 POLIQ9UNA4 740 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 NUB1Q9Y5A7 615 aa14.13□□□□□ -0.15
CHD3-210ENST00000479080 CASTOR2A6NHX0 329 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 THP07101 528 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 TPM2P07951 284 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 LINC00271P0C7V0 271 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 FXR1P51114 621 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHD3-210ENST00000479080 CLCNKBP51801 687 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms