RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 BRCA2P51587 3418 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 MBD5Q9P267 1494 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 CDC42BPAQ5VT25 1732 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 A0A0G2JLL6 359 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-207ENST00000478913 NPEPPSL1A6NEC2 478 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 AKR1B10O60218 316 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 EN2P19622 333 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-207ENST00000478913 C5AR1P21730 350 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 CTSSP25774 331 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 WNT3AP56704 352 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 RIN1Q13671 783 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 UBE3CQ15386 1083 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 ABHD15Q6UXT9 468 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 MSL3Q8N5Y2 521 aaKnown RBP6.54□□□□□ -1.36
CCDC171-207ENST00000478913 GIMAP8Q8ND71 665 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-207ENST00000478913 SNX33Q8WV41 574 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 JDP2Q8WYK2 163 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 RIN2Q8WYP3 895 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-207ENST00000478913 DMRT3Q9NQL9 472 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 PPP4R1LQ9P1A2 415 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 NCDNQ9UBB6 729 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 SCOCQ9UIL1 159 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 RCAN3Q9UKA8 241 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 DNM3Q9UQ16 869 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 SBF2Q86WG5 1849 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 MUC3AQ02505 3323 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 SBNO1A3KN83 1393 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 LRRC37A3O60309 1634 aa6.54□□□□□ -1.36
CCDC171-207ENST00000478913 RPTORQ8N122 1335 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 USP6P35125 1406 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 A0A1W2PRX2 142 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 E2F8A0AVK6 867 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 PMS2P1A4D2B8 440 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 NRP1O14786 923 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 PHF2O75151 1096 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 MCAMP43121 646 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 SLC16A1P53985 500 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 ADAM8P78325 824 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 PIN1Q13526 163 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-207ENST00000478913 NFIXQ14938 502 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 ODF1Q14990 250 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 GJC2Q5T442 439 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-207ENST00000478913 GLB1LQ6UWU2 654 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 TTLL10Q6ZVT0 673 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 TAX1BP1Q86VP1 789 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 GPR156Q8NFN8 814 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 RBM12Q9NTZ6 932 aaKnown RBP6.53□□□□□ -1.36
CCDC171-207ENST00000478913 SAP30BPQ9UHR5 308 aaKnown RBP6.53□□□□□ -1.36
CCDC171-207ENST00000478913 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 G3BP2Q9UN86 482 aaKnown RBP6.53□□□□□ -1.36
CCDC171-207ENST00000478913 TTC28Q96AY4 2481 aa6.53□□□□□ -1.36
CCDC171-207ENST00000478913 HSP90B1P14625 803 aaKnown RBP6.52□□□□□ -1.37
CCDC171-207ENST00000478913 TGFB2P61812 414 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 DUSP2Q05923 314 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 SAFB2Q14151 953 aaKnown RBP eCLIP6.52□□□□□ -1.37
CCDC171-207ENST00000478913 NOMO1Q15155 1222 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 C19orf54Q5BKX5 351 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 CIR1Q86X95 450 aaPredicted RBP6.52□□□□□ -1.37
CCDC171-207ENST00000478913 CMTM4Q8IZR5 234 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 CNTROBQ8N137 903 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 CPA6Q8N4T0 437 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 ZNF480Q8WV37 535 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 GNRHR2Q96P88 292 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 GPHA2Q96T91 129 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 METTL14Q9HCE5 456 aaKnown RBP6.52□□□□□ -1.37
CCDC171-207ENST00000478913 IL23AQ9NPF7 189 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 IP6K2Q9UHH9 426 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 LAMA2P24043 3122 aaKnown RBP6.52□□□□□ -1.37
CCDC171-207ENST00000478913 PKD1L3Q7Z443 1732 aa6.52□□□□□ -1.37
CCDC171-207ENST00000478913 ERBINQ96RT1 1412 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 NRXN3Q9Y4C0 1643 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 AKAP10O43572 662 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 CT47B1P0C2W7 299 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-207ENST00000478913 TSPY4P0CV99 314 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 TSPY10P0CW01 314 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 GSPT1P15170 499 aaKnown RBP6.51□□□□□ -1.37
CCDC171-207ENST00000478913 GYPEP15421 78 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 ECHS1P30084 290 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 ADSLP30566 484 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-207ENST00000478913 RPS19P39019 145 aaKnown RBP6.51□□□□□ -1.37
CCDC171-207ENST00000478913 RAB27AP51159 221 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 NPEPPSP55786 919 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 KIF23Q02241 960 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-207ENST00000478913 ERICH6BQ5W0A0 696 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 LIMS2Q7Z4I7 341 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 ADGRE4PQ86SQ3 457 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 CMTR2Q8IYT2 770 aaKnown RBP6.51□□□□□ -1.37
CCDC171-207ENST00000478913 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 OR14A2Q96R54 314 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 PLA2G12BQ9BX93 195 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 NELFAQ9H3P2 528 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 KLHL42Q9P2K6 505 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
CCDC171-207ENST00000478913 LAMB4A4D0S4 1761 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 CCNB3Q8WWL7 1395 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 FAM171A2A8MVW0 826 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 ABLIM3O94929 683 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 IL33O95760 270 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms