RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CDKL5O76039 1030 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 ABLIM3O94929 683 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 PRKCBP05771 671 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 PSMC3P17980 439 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 LIG1P18858 919 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 SATB1Q01826 763 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 ROR1Q01973 937 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 CALCRLQ16602 461 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 UPP1Q16831 310 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 GLRA4Q5JXX5 417 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 CYP4A22Q5TCH4 519 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 PPP1R10Q96QC0 940 aaKnown RBP18.92■□□□□ 0.62
VIM-204ENST00000478746 CYP4F11Q9HBI6 524 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 USP24Q9UPU5 2620 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 FAM205CA6NFA0 338 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 NRG2O14511 850 aaPredicted RBP18.91■□□□□ 0.62
VIM-204ENST00000478746 GDF9O60383 454 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 CHRNB1P11230 501 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 ATF2P15336 505 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 KCNA4P22459 653 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 CNR2P34972 360 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 TXKP42681 527 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 BRCC3P46736 316 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 ARPP19P56211 112 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 EEF1DP3Q658K8 133 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 SLC8B1Q6J4K2 584 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 VITQ6UXI7 678 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 PDZD4Q76G19 769 aaPredicted RBP18.91■□□□□ 0.62
VIM-204ENST00000478746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.91■□□□□ 0.62
VIM-204ENST00000478746 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
VIM-204ENST00000478746 SMARCD2Q92925 531 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 ZSWIM3Q96MP5 696 aa18.91■□□□□ 0.62
VIM-204ENST00000478746 ZFHX4Q86UP3 3567 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 WDR27A2RRH5 827 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 CHURC1-FNTBB4DL54 471 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 ZNF263O14978 683 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 FOXD2O60548 495 aaPredicted RBP18.9■□□□□ 0.62
VIM-204ENST00000478746 REC8O95072 547 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 CCNE1P24864 410 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 CCR2P41597 374 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 FNTBP49356 437 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 DCAF4L1Q3SXM0 396 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 TCEAL8Q8IYN2 117 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 ELMOD1Q8N336 334 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 SPEM1Q8N4L4 309 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 DEPDC1BQ8WUY9 529 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 GOLGA2P5Q9HBQ8 144 aa18.9■□□□□ 0.62
VIM-204ENST00000478746 DAXXQ9UER7 740 aaPredicted RBP18.9■□□□□ 0.62
VIM-204ENST00000478746 CNOT1A5YKK6 2376 aaKnown RBP18.89■□□□□ 0.61
VIM-204ENST00000478746 SEC24AO95486 1093 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 VIPR2P41587 438 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 DMWDQ09019 674 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 SRSF5Q13243 272 aaKnown RBP18.89■□□□□ 0.61
VIM-204ENST00000478746 NR5A1Q13285 461 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 GAS6Q14393 721 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 HS6ST3Q8IZP7 471 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 C3orf58Q8NDZ4 430 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 DEPTORQ8TB45 409 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 BSNDQ8WZ55 320 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 ZNF512Q96ME7 567 aaPredicted RBP18.89■□□□□ 0.61
VIM-204ENST00000478746 CCDC113Q9H0I3 377 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 INSL5Q9Y5Q6 135 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 TRIP11Q15643 1979 aa18.89■□□□□ 0.61
VIM-204ENST00000478746 TICRRQ7Z2Z1 1910 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 SMIM28A0A1B0GU29 152 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 H7C4K7 107 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 EDN1P05305 212 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 SPATA31C1P0DKV0 1188 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 KRT2P35908 639 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 SCRN1Q12765 414 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 IL31Q6EBC2 164 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 LONP2Q86WA8 852 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 MFSD6LQ8IWD5 586 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 CSGALNACT1Q8TDX6 532 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 ANGPTL2Q9UKU9 493 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 STK36Q9NRP7 1315 aa18.88■□□□□ 0.61
VIM-204ENST00000478746 NEMFO60524 1076 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 DTNBO60941 627 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 NAMPTP43490 491 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 MLLT6P55198 1093 aaPredicted RBP18.87■□□□□ 0.61
VIM-204ENST00000478746 PTGDRQ13258 359 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 LRRC32Q14392 662 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 TPGS2Q68CL5 300 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 HEATR6Q6AI08 1181 aaKnown RBP18.87■□□□□ 0.61
VIM-204ENST00000478746 CEP68Q76N32 757 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
VIM-204ENST00000478746 APBB1IPQ7Z5R6 666 aaPredicted RBP18.87■□□□□ 0.61
VIM-204ENST00000478746 CATSPER3Q86XQ3 398 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 ZSCAN18Q8TBC5 510 aaPredicted RBP18.87■□□□□ 0.61
VIM-204ENST00000478746 MTMR9Q96QG7 549 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 TM6SF1Q9BZW5 370 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 TRPV4Q9HBA0 871 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 BRMS1Q9HCU9 246 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 TUFT1Q9NNX1 390 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
VIM-204ENST00000478746 HEPACAM2A8MVW5 462 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 SYN3O14994 580 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 MOSPD3O75425 235 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms