RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 PPFIBP1Q86W92 1011 aa11.17□□□□□ -0.62
LCLAT1-209ENST00000478015 MAP4K3Q8IVH8 894 aa11.17□□□□□ -0.62
LCLAT1-209ENST00000478015 SFXN1Q9H9B4 322 aa11.17□□□□□ -0.62
LCLAT1-209ENST00000478015 DZANK1Q9NVP4 752 aa11.17□□□□□ -0.62
LCLAT1-209ENST00000478015 PRR33A8MZF0 331 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 SPTLC2O15270 562 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 TBC1D4O60343 1298 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 F13A1P00488 732 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 KRT18P05783 430 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 ADRB2P07550 413 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 HOXD13P35453 343 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 DNM1Q05193 864 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 KREMEN2Q8NCW0 462 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 CDY1Q9Y6F8 540 aa11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 ZFHX2Q9C0A1 2572 aaPredicted RBP11.16□□□□□ -0.62
LCLAT1-209ENST00000478015 COL4A3Q01955 1670 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 FRMD3A2A2Y4 597 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 SPTLC1O15269 473 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 NFICP08651 508 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 LIG4P49917 911 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 STK38Q15208 465 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 IER5LQ5T953 404 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 C15orf39Q6ZRI6 1047 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 BICD1Q96G01 975 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 MYADMQ96S97 322 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 ST6GALNAC4Q9H4F1 302 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 HCFC1R1Q9NWW0 138 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 MTRRQ9UBK8 725 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 STK17AQ9UEE5 414 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 STK39Q9UEW8 545 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 FBXW11Q9UKB1 542 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 PCDHA7Q9UN72 937 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 STYXL1Q9Y6J8 313 aa11.15□□□□□ -0.62
LCLAT1-209ENST00000478015 VNN2O95498 520 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 CLTAP09496 248 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 MTHFRP42898 656 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 MRPL58Q14197 206 aaKnown RBP11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 PTPN21Q16825 1174 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 VARS2Q5ST30 1063 aaKnown RBP11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 JADE1Q6IE81 842 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 GPR65Q8IYL9 337 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 RIPOR3Q96MK2 946 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 NECTIN4Q96NY8 510 aa11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 WDR6Q9NNW5 1121 aaKnown RBP11.15□□□□□ -0.63
LCLAT1-209ENST00000478015 WDR27A2RRH5 827 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 OGTO15294 1046 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 PPP6R2O75170 966 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 TBCAO75347 108 aaKnown RBP11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 ZMYND10O75800 440 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 SEC24AO95486 1093 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 STAT6P42226 847 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 MATR3P43243 847 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■■■■ 27.5
LCLAT1-209ENST00000478015 RAB33AQ14088 237 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 SV2BQ7L1I2 683 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 EFCAB13Q8IY85 973 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 CMASQ8NFW8 434 aaPredicted RBP11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 MSTO1Q9BUK6 570 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 KBTBD4Q9NVX7 518 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 CCDC39Q9UFE4 941 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 SSX2IPQ9Y2D8 614 aa11.14□□□□□ -0.63
LCLAT1-209ENST00000478015 KMT2EQ8IZD2 1858 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 CCL16O15467 120 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 NARSO43776 548 aaKnown RBP11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 IDEP14735 1019 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 ROR1Q01973 937 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 GRAMD1CQ8IYS0 662 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 SLC7A14Q8TBB6 771 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 DHX58Q96C10 678 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 SUSD3Q96L08 255 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 UROC1Q96N76 676 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 CBWD1Q9BRT8 395 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 TRIM9Q9C026 710 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 CRISPLD1Q9H336 500 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 MRPL44Q9H9J2 332 aaKnown RBP11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 KCNK12Q9HB15 430 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 SLC38A7Q9NVC3 462 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 USTQ9Y2C2 406 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 TSC2P49815 1807 aa11.13□□□□□ -0.63
LCLAT1-209ENST00000478015 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
LCLAT1-209ENST00000478015 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
LCLAT1-209ENST00000478015 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
LCLAT1-209ENST00000478015 M0R296 226 aa11.12□□□□□ -0.63
LCLAT1-209ENST00000478015 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
LCLAT1-209ENST00000478015 ABLIM3O94929 683 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms