RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 GUCY1A2P33402 732 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 PCBP1Q15365 356 aaKnown RBP eCLIP4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 SF3B3Q15393 1217 aaKnown RBP4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 FSCN1Q16658 493 aaKnown RBP4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 FCRLBQ6BAA4 426 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 HOMEZQ8IX15 550 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 CASKIN2Q8WXE0 1202 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 SLC5A5Q92911 643 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 EAF2Q96CJ1 260 aaPredicted RBP4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 UHRF1Q96T88 793 aaPredicted RBP4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 KANSL2Q9H9L4 492 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 EMC7Q9NPA0 242 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 WNT6Q9Y6F9 365 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 AOX1Q06278 1338 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 GSG1L2A8MUP6 293 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 WNT10BO00744 389 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 BMP15O95972 392 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 ALAS1P13196 640 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 SLC6A2P23975 617 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 MAPK10P53779 464 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 EIF2B5Q13144 721 aaKnown RBP4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 LLGL1Q15334 1064 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 ZNF529Q6P280 563 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 CNNM4Q6P4Q7 775 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 SEM1Q6ZVN7 128 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 PEG10Q86TG7 708 aaKnown RBP4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 PQLC1Q8N2U9 271 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 NINJ1Q92982 152 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 MRFAP1L1Q96HT8 127 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 ACAP3Q96P50 834 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 FCRL4Q96PJ5 515 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 LANCL2Q9NS86 450 aa4.8□□□□□ -1.64
NCKAP1-204ENST00000477988 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 PER3P56645 1201 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 SF3A1Q15459 793 aaKnown RBP4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 SEPT7Q16181 437 aaKnown RBP4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 TSTD2Q5T7W7 516 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 Q8NA96 180 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 FATE1Q969F0 183 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 MARS2Q96GW9 593 aaKnown RBP4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 SENP6Q9GZR1 1112 aaPredicted RBP4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 FBXO34Q9NWN3 711 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 DPP7Q9UHL4 492 aa4.79□□□□□ -1.64
NCKAP1-204ENST00000477988 TP73O15350 636 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 ALDH1A3P47895 512 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 EXOSC10Q01780 885 aaKnown RBP4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 PDCD1Q15116 288 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 PTPRRQ15256 657 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 MTX3Q5HYI7 312 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 VGLL2Q8N8G2 317 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 SEMA6DQ8NFY4 1073 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 FBXO18Q8NFZ0 1043 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 PGBD1Q96JS3 809 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 SEMA4CQ9C0C4 833 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 GREM2Q9H772 168 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 RBM12Q9NTZ6 932 aaKnown RBP4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 TMEM140Q9NV12 185 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 HSFX1Q9UBD0 423 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 SLC23A1Q9UHI7 598 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 SCOCQ9UIL1 159 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 CD2APQ9Y5K6 639 aa4.78□□□□□ -1.64
NCKAP1-204ENST00000477988 A0A1W2PS29 197 aa4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 ENPP1P22413 925 aa4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 MRPS9P82933 396 aaKnown RBP4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 BMS1Q14692 1282 aaKnown RBP4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 ADRM1Q16186 407 aa4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 ZNF517Q6ZMY9 492 aaPredicted RBP4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 HOXB13Q92826 284 aaPredicted RBP4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 FBXL20Q96IG2 436 aa4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 FEZ1Q99689 392 aa4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 INTS13Q9NVM9 706 aa4.77□□□□□ -1.65
NCKAP1-204ENST00000477988 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 GCOM1H8Y6P7 765 aaPredicted RBP4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 TUBA4AP68366 448 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 NOMO3P69849 1222 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 CDK17Q00537 523 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 GRM1Q13255 1194 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 NOMO1Q15155 1222 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 ANO4Q32M45 955 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 ATP13A4Q4VNC1 1196 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 MUM1L1Q5H9M0 696 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 NOMO2Q5JPE7 1267 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 STON2Q8WXE9 905 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 AUTS2Q8WXX7 1259 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 TFAP2BQ92481 460 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 CYFIP2Q96F07 1278 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 ZNF48Q96MX3 618 aaPredicted RBP4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 ZNF580Q9UK33 172 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 NEU2Q9Y3R4 380 aa4.76□□□□□ -1.65
NCKAP1-204ENST00000477988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.75□□□□□ -1.65
NCKAP1-204ENST00000477988 ENDOD1O94919 500 aa4.75□□□□□ -1.65
NCKAP1-204ENST00000477988 ELFN1P0C7U0 828 aa4.75□□□□□ -1.65
NCKAP1-204ENST00000477988 PRR35P0CG20 571 aa4.75□□□□□ -1.65
NCKAP1-204ENST00000477988 KELP23276 732 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms