RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PUF60Q9UHX1 559 aaKnown RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 CPA4Q9UI42 421 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 GTF3C4Q9UKN8 822 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 AMFRQ9UKV5 643 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 TTC7AQ9ULT0 858 aaPredicted RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 GNEQ9Y223 722 aaKnown RBP8.52□□□□□ -1.05
VMA21-203ENST00000477649 AKT3Q9Y243 479 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 DERAQ9Y315 318 aa8.52□□□□□ -1.05
VMA21-203ENST00000477649 MBLAC1A4D2B0 266 aaPredicted RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 TK2O00142 265 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 TNPO2O14787 897 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 CYP26A1O43174 497 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 BUB1O43683 1085 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 ERLIN2O94905 339 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 CLSTN1O94985 981 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 KIF4AO95239 1232 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 LSM8O95777 96 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 STAU1O95793 577 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 ASS1P00966 412 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 IGHA2P01877 340 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 FTLP02792 175 aaPredicted RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 TMEM191BP0C7N4 346 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 ZNF865P0CJ78 1059 aaPredicted RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 AKR1A1P14550 325 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 HSPA6P17066 643 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 USP8P40818 1118 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 CLCN3P51790 818 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 NOP14P78316 857 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 ACAD10Q6JQN1 1059 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 FBXO38Q6PIJ6 1188 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 DAAM2Q86T65 1068 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 TLK2Q86UE8 772 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 EIF1ADQ8N9N8 165 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 ZSWIM2Q8NEG5 633 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 ZBTB45Q96K62 511 aaPredicted RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 POP1Q99575 1024 aaKnown RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 PLVAPQ9BX97 442 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 PARD6BQ9BYG5 372 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 GCOM2Q9BZD3 368 aaPredicted RBP8.51□□□□□ -1.05
VMA21-203ENST00000477649 ZNF518BQ9C0D4 1074 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 DNAI2Q9GZS0 605 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 HAPLN2Q9GZV7 340 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 CDT1Q9H211 546 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 VRTNQ9H8Y1 702 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 IFT122Q9HBG6 1241 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 SALL4Q9UJQ4 1053 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 TFR2Q9UP52 801 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 LHX6Q9UPM6 363 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 C2CD2Q9Y426 696 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 TRPM7Q96QT4 1865 aa8.51□□□□□ -1.05
VMA21-203ENST00000477649 ZNFX1Q9P2E3 1918 aaKnown RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 A0A1B0GUA9 196 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CCDC188H7C350 402 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 HAS3O00219 553 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 DYNC1LI2O43237 492 aaPredicted RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 DUSP11O75319 330 aaKnown RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 SGPL1O95470 568 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CYP1A2P05177 515 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 NUDT7P0C024 238 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 KRT5P13647 590 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 SLC1A1P43005 524 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 FCGRTP55899 365 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 TNNC1P63316 161 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 IGBP1P78318 339 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 NKX3-2P78367 333 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 FMO1Q01740 532 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 AMHR2Q16671 573 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CLEC16AQ2KHT3 1053 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 LIN9Q5TKA1 542 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 MFSD14CQ5VZR4 134 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 TAF2Q6P1X5 1199 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 NFRKBQ6P4R8 1299 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 NOP9Q86U38 636 aaKnown RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 KIAA0319LQ8IZA0 1049 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 UBL4BQ8N7F7 174 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 SMC1BQ8NDV3 1235 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 SPATA4Q8NEY3 305 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 OLIG1Q8TAK6 271 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 SLC35G2Q8TBE7 412 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 DDX1Q92499 740 aaKnown RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 TSC1Q92574 1164 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 TATDN2Q93075 761 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 HES6Q96HZ4 224 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 RUNDC3BQ96NL0 473 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 SCLT1Q96NL6 688 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 MMS19Q96T76 1030 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CCDC94Q9BW85 323 aaPredicted RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 PACSIN1Q9BY11 444 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CARD9Q9H257 536 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 ACBD3Q9H3P7 528 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 DOCK5Q9H7D0 1870 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CYP3A43Q9HB55 503 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 SPC25Q9HBM1 224 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 MRPL47Q9HD33 250 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms