RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MMEP08473 750 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 CXCL8P10145 99 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 CASQ1P31415 396 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 CENPCQ03188 943 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 SNX17Q15036 470 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 PPP1R15BQ5SWA1 713 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-203ENST00000477626 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-203ENST00000477626 ANKFY1Q9P2R3 1169 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 JRKLQ9Y4A0 524 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 ALPK3Q96L96 1907 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 KPNA6O60684 536 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 VEGFBP49765 207 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 GALCP54803 685 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 NME8Q8N427 588 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 RASGEF1CQ8N431 466 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 SECISBP2LQ93073 1101 aaKnown RBP13.05□□□□□ -0.32
PRPF39-203ENST00000477626 EIF2AQ9BY44 585 aaKnown RBP13.05□□□□□ -0.32
PRPF39-203ENST00000477626 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 GREB1Q4ZG55 1949 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 CYP26A1O43174 497 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 KRT86O43790 486 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 KIF5CO60282 957 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 SLU7O95391 586 aaKnown RBP13.05□□□□□ -0.32
PRPF39-203ENST00000477626 MAGEA1P43355 309 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 CLEC16AQ2KHT3 1053 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 JADE1Q6IE81 842 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 PCMTD1Q96MG8 357 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-203ENST00000477626 ASB7Q9H672 318 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 SAGE1Q9NXZ1 904 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 SRRDQ9UH36 339 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 GUCA1BQ9UMX6 200 aa13.05□□□□□ -0.32
PRPF39-203ENST00000477626 CALCAP01258 141 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-203ENST00000477626 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 ARRDC4Q8NCT1 418 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 DLATP10515 647 aaKnown RBP13.04□□□□□ -0.32
PRPF39-203ENST00000477626 MAP2K2P36507 400 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 CRYBB1P53674 252 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-203ENST00000477626 MFAP3P55082 362 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 CDC42EP1Q00587 391 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 DSC3Q14574 896 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 FAM228AQ86W67 206 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 ZNF677Q86XU0 584 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 COG1Q8WTW3 980 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 ZNF668Q96K58 619 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-203ENST00000477626 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 RAB21Q9UL25 225 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 NOP14P78316 857 aaKnown RBP13.04□□□□□ -0.32
PRPF39-203ENST00000477626 NCOA4Q13772 614 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 NT5C1BQ96P26 610 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
PRPF39-203ENST00000477626 TTC7AQ9ULT0 858 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-203ENST00000477626 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 CTAGE9A4FU28 777 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 KCNE1P15382 129 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 RPL34P49207 117 aaKnown RBP13.03□□□□□ -0.32
PRPF39-203ENST00000477626 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
PRPF39-203ENST00000477626 MYL6P60660 151 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 GPNMBQ14956 572 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 PKDCCQ504Y2 493 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 NT5DC4Q86YG4 428 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 TAF4BQ92750 862 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
PRPF39-203ENST00000477626 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 IGBP1P78318 339 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 KYAT1Q16773 422 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 WHAMMP3Q1A5X7 153 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 C11orf63Q6NUN7 778 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
PRPF39-203ENST00000477626 BICD1Q96G01 975 aa13.03□□□□□ -0.32
PRPF39-203ENST00000477626 ENC1O14682 589 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 ZNF185O15231 689 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 ZEB2O60315 1214 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 PALMO75781 387 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 GNRH1P01148 92 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 AXLP30530 894 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 KIF5AQ12840 1032 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 SURF1Q15526 300 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 KIZQ2M2Z5 673 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 DCAF4L1Q3SXM0 396 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.32
PRPF39-203ENST00000477626 METTL13Q8N6R0 699 aa13.02□□□□□ -0.32
PRPF39-203ENST00000477626 MMS19Q96T76 1030 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms