RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CPSF3Q9UKF6 684 aaKnown RBP23.71■■□□□ 1.39
COL9A3-211ENST00000477612 BACE2Q9Y5Z0 518 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 FAM86C2PA6NEL3 165 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 SPDYE4A6NLX3 237 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 ANKRD63C9JTQ0 380 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 BRCC3P46736 316 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 ZXDAP98168 799 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 POU5F1Q01860 360 aaKnown RBP23.7■■□□□ 1.38
COL9A3-211ENST00000477612 PKP1Q13835 747 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 RAB33AQ14088 237 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 ENOX2Q16206 610 aaKnown RBP23.7■■□□□ 1.38
COL9A3-211ENST00000477612 SLFN12LQ6IEE8 588 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 SHC4Q6S5L8 630 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 ANKS3Q6ZW76 656 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 GLYCTKQ8IVS8 523 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 CD302Q8IX05 232 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 PLCD3Q8N3E9 789 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 ZNF707Q96C28 371 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-211ENST00000477612 CUEDC2Q9H467 287 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 KBTBD4Q9NVX7 518 aa23.7■■□□□ 1.38
COL9A3-211ENST00000477612 TCHHQ07283 1943 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 SYN3O14994 580 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 RFPL2O75678 378 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 ZMYND10O75800 440 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 SPATA31D3P0C874 917 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 TKTP29401 623 aaKnown RBP23.69■■□□□ 1.38
COL9A3-211ENST00000477612 FOXD4L5Q5VV16 416 aaPredicted RBP23.69■■□□□ 1.38
COL9A3-211ENST00000477612 SPATA31D4Q6ZUB0 917 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 PDILTQ8N807 584 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 KCNG4Q8TDN1 519 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 FOXD4L4Q8WXT5 416 aaPredicted RBP23.69■■□□□ 1.38
COL9A3-211ENST00000477612 MSTO1Q9BUK6 570 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 TNMDQ9H2S6 317 aa23.69■■□□□ 1.38
COL9A3-211ENST00000477612 RPF1Q9H9Y2 349 aaKnown RBP23.69■■□□□ 1.38
COL9A3-211ENST00000477612 WDR6Q9NNW5 1121 aaKnown RBP23.69■■□□□ 1.38
COL9A3-211ENST00000477612 UBQLN1Q9UMX0 589 aaKnown RBP23.69■■□□□ 1.38
COL9A3-211ENST00000477612 LACTBL1A8MY62 500 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 ADAM12O43184 909 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 TBC1D4O60343 1298 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 PPP2R3AQ06190 1150 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 MRPL58Q14197 206 aaKnown RBP23.68■■□□□ 1.38
COL9A3-211ENST00000477612 PTPN21Q16825 1174 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 ZBTB41Q5SVQ8 909 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 CCDC149Q6ZUS6 474 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 RTL10Q7L3V2 364 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 BMP8AQ7Z5Y6 402 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 SUSD3Q96L08 255 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 PRKD2Q9BZL6 878 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 LRRC27Q9C0I9 530 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 MRPL44Q9H9J2 332 aaKnown RBP23.68■■□□□ 1.38
COL9A3-211ENST00000477612 TUBGCP4Q9UGJ1 667 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 CFAP45Q9UL16 551 aa23.68■■□□□ 1.38
COL9A3-211ENST00000477612 I3L4J1 428 aa23.67■■□□□ 1.38
COL9A3-211ENST00000477612 ALCAMQ13740 583 aa23.67■■□□□ 1.38
COL9A3-211ENST00000477612 CNNM4Q6P4Q7 775 aa23.67■■□□□ 1.38
COL9A3-211ENST00000477612 RSPO2Q6UXX9 243 aaPredicted RBP23.67■■□□□ 1.38
COL9A3-211ENST00000477612 TDRD5Q8NAT2 981 aaKnown RBP23.67■■□□□ 1.38
COL9A3-211ENST00000477612 TSHZ2Q9NRE2 1034 aa23.67■■□□□ 1.38
COL9A3-211ENST00000477612 RCOR1Q9UKL0 485 aa23.67■■□□□ 1.38
COL9A3-211ENST00000477612 XPOTO43592 962 aaKnown RBP23.66■■□□□ 1.38
COL9A3-211ENST00000477612 SP100P23497 879 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-211ENST00000477612 HOXA9P31269 272 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 OR1D2P34982 312 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 POSTNQ15063 836 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 UVSSAQ2YD98 709 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 L1TD1Q5T7N2 865 aaKnown RBP23.66■■□□□ 1.38
COL9A3-211ENST00000477612 SLC8B1Q6J4K2 584 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 TRIM67Q6ZTA4 783 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 OTOP3Q7RTS5 596 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 IQUBQ8NA54 791 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 SPRYD3Q8NCJ5 442 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 SMG7Q92540 1137 aaKnown RBP23.66■■□□□ 1.38
COL9A3-211ENST00000477612 ACSF2Q96CM8 615 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-211ENST00000477612 KIF12Q96FN5 646 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 ASB7Q9H672 318 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 PANK4Q9NVE7 773 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 PCDHA7Q9UN72 937 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 EXOC7Q9UPT5 735 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 NUB1Q9Y5A7 615 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 PCDHB13Q9Y5F0 798 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 CDY1Q9Y6F8 540 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 NOTCH4Q99466 2003 aa23.66■■□□□ 1.38
COL9A3-211ENST00000477612 TISP43B9A030 160 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 POU2F2P09086 479 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 HNRNPA1P09651 372 aaKnown RBP eCLIP23.65■■□□□ 1.38
COL9A3-211ENST00000477612 IDEP14735 1019 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 ADSSP30520 456 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 AARSP49588 968 aaKnown RBP eCLIP23.65■■□□□ 1.38
COL9A3-211ENST00000477612 SPAG1Q07617 926 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 KCNA1Q09470 495 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 VARS2Q5ST30 1063 aaKnown RBP23.65■■□□□ 1.38
COL9A3-211ENST00000477612 SPATA1Q5VX52 437 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 ADALQ6DHV7 355 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 ACCSQ96QU6 501 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 TRIM9Q9C026 710 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 AGO2Q9UKV8 859 aaKnown RBP23.65■■□□□ 1.38
COL9A3-211ENST00000477612 SORCS3Q9UPU3 1222 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 DERAQ9Y315 318 aa23.65■■□□□ 1.38
COL9A3-211ENST00000477612 ARIH1Q9Y4X5 557 aaPredicted RBP23.65■■□□□ 1.38
COL9A3-211ENST00000477612 SCN1AP35498 2009 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms