RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 SREBF1P36956 1147 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 FXR1P51114 621 aaKnown RBP eCLIP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PER3P56645 1201 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 IL10RAQ13651 578 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 RRP12Q5JTH9 1297 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PRAMEF14Q5SWL7 426 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 GJC2Q5T442 439 aaPredicted RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 FAM102BQ5T8I3 360 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 MIGA2Q7L4E1 593 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 DOK3Q7L591 496 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 CATIPQ7Z7H3 387 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 ARHGEF19Q8IW93 802 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 RHOT1Q8IXI2 618 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 TRMT2AQ8IZ69 625 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 OR7D4Q8NG98 312 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 KAT5Q92993 513 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 RAB24Q969Q5 203 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 HDAC10Q969S8 669 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 DCLRE1CQ96SD1 692 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 UHRF1Q96T88 793 aaPredicted RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 NUP88Q99567 741 aaPredicted RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 C7orf25Q9BPX7 421 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 LSM14BQ9BX40 385 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 GTPBP4Q9BZE4 634 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 R3HDMLQ9H3Y0 253 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PRDM13Q9H4Q3 707 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 LDAHQ9H6V9 325 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 BCO1Q9HAY6 547 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 AKIP1Q9NQ31 210 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PNMA8BQ9ULN7 279 aaPredicted RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PCDHA13Q9Y5I0 950 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 TMEM200CA6NKL6 621 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 ENDOD1O94919 500 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 POU2F2P09086 479 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 TYRP1P17643 537 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 AKAP5P24588 427 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 CYP2C19P33261 490 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 PTPN7P35236 360 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 GZMKP49863 264 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 MRPL49Q13405 166 aaKnown RBP3.35□□□□□ -1.87
CACUL1-202ENST00000477583 ZNF267Q14586 743 aaPredicted RBP3.35□□□□□ -1.87
CACUL1-202ENST00000477583 ERCC6LQ2NKX8 1250 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 GLCCI1Q86VQ1 547 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 PLXDC1Q8IUK5 500 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 TCEAL8Q8IYN2 117 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 PRR18Q8N4B5 295 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 CCHCR1Q8TD31 782 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 STON2Q8WXE9 905 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 CAVIN3Q969G5 261 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 CEP95Q96GE4 821 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 LRGUKQ96M69 825 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 COQ10AQ96MF6 247 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 CDC5LQ99459 802 aaKnown RBP3.35□□□□□ -1.87
CACUL1-202ENST00000477583 SLC12A5Q9H2X9 1139 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 RSAD1Q9HA92 442 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 ANLNQ9NQW6 1124 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 LANCL2Q9NS86 450 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 SYBUQ9NX95 663 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 CHPF2Q9P2E5 772 aa3.35□□□□□ -1.87
CACUL1-202ENST00000477583 COL11A2P13942 1736 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 PRR5-ARHGAP8B1AHC4 643 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 INO80B-WBP1J3KQ70 363 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 AP1G1O43747 822 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 MARCH6O60337 910 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 OFD1O75665 1012 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 NDUFA10O95299 355 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 AMY1AP04745 511 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 HKR1P10072 659 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 LPOP22079 712 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 GUCY1A2P33402 732 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 RNASE9P60153 205 aaKnown RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 APBA1Q02410 837 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 DSC2Q02487 901 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 TARDBPQ13148 414 aaKnown RBP eCLIP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 GTF2H3Q13889 308 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 MLC1Q15049 377 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 BEAN1Q3B7T3 259 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 MFSD14BQ5SR56 506 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 IFIT1BQ5T764 474 aaKnown RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 NXNQ6DKJ4 435 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 CXorf57Q6NSI4 855 aaKnown RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 FBXO42Q6P3S6 717 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 B3GNT9Q6UX72 402 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 USP45Q70EL2 814 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 PDZD4Q76G19 769 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 EPM2AIP1Q7L775 607 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 ZNF572Q7Z3I7 529 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 XYLT1Q86Y38 959 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 WDR75Q8IWA0 830 aaKnown RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 GRAMD1CQ8IYS0 662 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 MYO1HQ8N1T3 1032 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 ZGPATQ8N5A5 531 aaKnown RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 MAGEB6Q8N7X4 407 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 HPS3Q969F9 1004 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 AIFM3Q96NN9 605 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 INO80BQ9C086 356 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 SENP6Q9GZR1 1112 aaPredicted RBP3.34□□□□□ -1.87
CACUL1-202ENST00000477583 MANSC1Q9H8J5 431 aa3.34□□□□□ -1.87
CACUL1-202ENST00000477583 TDP1Q9NUW8 608 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms