RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	ZSWIM4	Q9H7M6	989 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	MRPL44	Q9H9J2	332 aa	Known RBP	5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	LZTFL1	Q9NQ48	299 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	HAUS2	Q9NVX0	235 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	SCOC	Q9UIL1	159 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	PCDHA7	Q9UN72	937 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	SLC12A4	Q9UP95	1085 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	TMED5	Q9Y3A6	229 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	RBM8A	Q9Y5S9	174 aa	Known RBP	5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	NHS	Q6T4R5	1651 aa		5.11	□□□□□ -1.59
PTCD3-212	ENST00000477520	GOLGA8A	A7E2F4	631 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	CHURC1-FNTB	B4DL54	471 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520		O00370	1275 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	DNM1L	O00429	736 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SLC27A2	O14975	620 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	BTAF1	O14981	1849 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PLSCR1	O15162	318 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SUV39H1	O43463	412 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	STRN	O43815	780 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ORC4	O43929	436 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SIPA1L3	O60292	1781 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	HNRNPCL1	O60812	293 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	CACNA1F	O60840	1977 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	STARD3NL	O95772	234 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZMYM6	O95789	1325 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	MAP4K4	O95819	1239 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	EIF2S1	P05198	315 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PYGL	P06737	847 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	HOXB7	P09629	217 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SNRPA1	P09661	255 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	MYZAP	P0CAP1	466 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	TNFRSF1A	P19438	455 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	CALB2	P22676	271 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	GNAQ	P50148	359 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SERPINB8	P50452	374 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NDUFA8	P51970	172 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PHEX	P78562	749 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	CDK17	Q00537	523 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ATP2B2	Q01814	1243 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NMI	Q13287	307 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ITGB3BP	Q13352	177 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SNX1	Q13596	522 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	KPNB1	Q14974	876 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	TAF11	Q15544	211 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PABPC1L	Q4VXU2	614 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ANKRD20A2	Q5SQ80	823 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ANKRD20A1	Q5TYW2	823 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ANKRD20A3	Q5VUR7	823 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SPATA1	Q5VX52	437 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NCAPH2	Q6IBW4	605 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	UNC13D	Q70J99	1090 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	RSPH3	Q86UC2	560 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	EXOC8	Q8IYI6	725 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	CLASRP	Q8N2M8	674 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	TSPYL6	Q8N831	410 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NOA1	Q8NC60	698 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NSUN7	Q8NE18	718 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ACRBP	Q8NEB7	543 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NOC3L	Q8WTT2	800 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PALLD	Q8WX93	1383 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	NCSTN	Q92542	709 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	RRP36	Q96EU6	259 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	STAMBPL1	Q96FJ0	436 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	RNPC3	Q96LT9	517 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	FGD4	Q96M96	766 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	OLFM3	Q96PB7	478 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	USP28	Q96RU2	1077 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PYM1	Q9BRP8	204 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	AGXT2	Q9BYV1	514 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	KRT23	Q9C075	422 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	RAB17	Q9H0T7	212 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	STMN4	Q9H169	189 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	HSD3B7	Q9H2F3	369 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	CCDC134	Q9H6E4	229 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	PLCB1	Q9NQ66	1216 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ECHDC1	Q9NTX5	307 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	EXOC1	Q9NV70	894 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	TBCCD1	Q9NVR7	557 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	FANCL	Q9NW38	375 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SPATA7	Q9P0W8	599 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	SAMD15	Q9P1V8	674 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ASAP1	Q9ULH1	1129 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	HPSE	Q9Y251	543 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	TLR6	Q9Y2C9	796 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	ZNF510	Q9Y2H8	683 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	COMMD3-BMI1	R4GMX3	469 aa		5.1	□□□□□ -1.59
PTCD3-212	ENST00000477520	MYH15	Q9Y2K3	1946 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	TOGARAM1	Q9Y4F4	1720 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	HEG1	Q9ULI3	1381 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	GRID2IP	A4D2P6	1211 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	MAGEA13P	A6NCF6	341 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	TMEM221	A6NGB7	291 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520		F8VZ95	297 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	CES2	O00748	559 aa		5.09	□□□□□ -1.59
PTCD3-212	ENST00000477520	DIAPH2	O60879	1101 aa		5.09	□□□□□ -1.59

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