RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 RFFLQ8WZ73 363 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 USP6NLQ92738 828 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 TRIM11Q96F44 468 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 ACO2Q99798 780 aaKnown RBP7.18□□□□□ -1.26
LDB3-206ENST00000477489 PTPN18Q99952 460 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 SH2D3AQ9BRG2 576 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 FAM213AQ9BRX8 229 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 C16orf70Q9BSU1 422 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 KIFC3Q9BVG8 833 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 KATNAL1Q9BW62 490 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CARD6Q9BX69 1037 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 IMPG2Q9BZV3 1241 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 GPR88Q9GZN0 384 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 PTPRHQ9HD43 1115 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 UBE2TQ9NPD8 197 aaPredicted RBP7.18□□□□□ -1.26
LDB3-206ENST00000477489 C1orf112Q9NSG2 853 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 RBAKQ9NYW8 714 aaPredicted RBP7.18□□□□□ -1.26
LDB3-206ENST00000477489 SNX12Q9UMY4 172 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.18□□□□□ -1.26
LDB3-206ENST00000477489 CNTNAP2Q9UHC6 1331 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 MGAMO43451 1857 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 MACROD2A1Z1Q3 448 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 TTC24A2A3L6 582 aaPredicted RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 TARSL2A2RTX5 802 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 TISP43B9A030 160 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 H3BRB1 525 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 DDX3XO00571 662 aaKnown RBP eCLIP7.17□□□□□ -1.26
LDB3-206ENST00000477489 RRP9O43818 475 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 B4GALT4O60513 344 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 PEX10O60683 326 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 RTN2O75298 545 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 MTA2O94776 668 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 F2P00734 622 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 IGHA2P01877 340 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 C4BPAP04003 597 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 MYBL1P10243 752 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 INSRRP14616 1297 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 H2AFXP16104 143 aaPredicted RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 TNNI1P19237 187 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 TM4SF4P48230 202 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 CPT1AP50416 773 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 PDE6CP51160 858 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 ZNF157P51786 506 aaPredicted RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 YWHAEP62258 255 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 CDR2Q01850 454 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 MBTD1Q05BQ5 628 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 PRPF4BQ13523 1007 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 BRD3Q15059 726 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 PPP2R5EQ16537 467 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 GLE1Q53GS7 698 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 EFCAB12Q6NXP0 572 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 CRELD2Q6UXH1 353 aaPredicted RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 SLFN11Q7Z7L1 901 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 MSANTD4Q8NCY6 345 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 PLEKHO2Q8TD55 490 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 HNRNPLLQ8WVV9 542 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 CCDC127Q96BQ5 260 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 SAAL1Q96ER3 474 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 MRGPRX2Q96LB1 330 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 APBA2Q99767 749 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 AGPAT1Q99943 283 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 TARS2Q9BW92 718 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 INO80BQ9C086 356 aaPredicted RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 ISCUQ9H1K1 167 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 IKZF4Q9H2S9 585 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 ASB7Q9H672 318 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 SUGCTQ9HAC7 445 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 PDGFCQ9NRA1 345 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 CPSF3Q9UKF6 684 aaKnown RBP7.17□□□□□ -1.26
LDB3-206ENST00000477489 CNTN6Q9UQ52 1028 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 TELO2Q9Y4R8 837 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 NRCAMQ92823 1304 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 RALGAPA2Q2PPJ7 1873 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 EVPLQ92817 2033 aa7.17□□□□□ -1.26
LDB3-206ENST00000477489 ANK1P16157 1881 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 SMIM35A0A1B0GVV1 85 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 CCDC151A5D8V7 595 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 GOLGA8IPA6NC78 632 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 GOLGA8JA6NMD2 632 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 FOXN3O00409 490 aaPredicted RBP7.16□□□□□ -1.26
LDB3-206ENST00000477489 ABLIM1O14639 778 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 FAM189A1O60320 539 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 ERLIN1O75477 346 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 CLSTN1O94985 981 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 STAU1O95793 577 aaKnown RBP7.16□□□□□ -1.26
LDB3-206ENST00000477489 ATP1A1P05023 1023 aaKnown RBP7.16□□□□□ -1.26
LDB3-206ENST00000477489 GNAT1P11488 350 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 SMPD1P17405 629 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 KLRC1P26715 233 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 AXLP30530 894 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 ADCYAP1R1P41586 468 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PAFAH1B1P43034 410 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 WNT7BP56706 349 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 NKX3-2P78367 333 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 SKOR1P84550 965 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 ARID5AQ03989 594 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 PPFIA1Q13136 1202 aa7.16□□□□□ -1.26
LDB3-206ENST00000477489 DUOXA2Q1HG44 320 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms