RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-208	ENST00000477440	NELFCD	Q8IXH7	590 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	ADAMTS19	Q8TE59	1207 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	RIN2	Q8WYP3	895 aa	Predicted RBP	27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	FAM213A	Q9BRX8	229 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	PCIF1	Q9H4Z3	704 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	EXOC1	Q9NV70	894 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	CHMP5	Q9NZZ3	219 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	UBQLN1	Q9UMX0	589 aa	Known RBP	27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	SSX2IP	Q9Y2D8	614 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	UBE4B	O95155	1302 aa		27.58	■■■□□ 2.01
ARHGEF3-208	ENST00000477440	TTC28	Q96AY4	2481 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	GRXCR2	A6NFK2	248 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440		I3L4J1	428 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	TEX28	O15482	410 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	NFIC	P08651	508 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	SRGAP2B	P0DMP2	458 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	EPCAM	P16422	314 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	RPL9	P32969	192 aa	Known RBP	27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	GUCY2F	P51841	1108 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	ELAVL2	Q12926	359 aa	Known RBP	27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	ARMCX5	Q6P1M9	558 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	CEP57	Q86XR8	500 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	CD302	Q8IX05	232 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	FMR1NB	Q8N0W7	255 aa	Predicted RBP	27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	KIAA0895	Q8NCT3	520 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	SLC22A17	Q8WUG5	538 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	TTPAL	Q9BTX7	342 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	RXFP1	Q9HBX9	757 aa		27.57	■■■□□ 2
ARHGEF3-208	ENST00000477440	GOLGA8IP	A6NC78	632 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	GOLGA8J	A6NMD2	632 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	MBTPS2	O43462	519 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	RPN1	P04843	607 aa	Known RBP	27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	KLRC2	P26717	231 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	DPYD	Q12882	1025 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	STK4	Q13043	487 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	ANKRD54	Q6NXT1	300 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	SMRP1	Q8NCR6	262 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	CASP10	Q92851	521 aa		27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	NECAB3	Q96P71	396 aa	Predicted RBP	27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	MTCL1	Q9Y4B5	1905 aa	Known RBP	27.56	■■■□□ 2
ARHGEF3-208	ENST00000477440	TGFB1I1	O43294	461 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	RPL17	P18621	184 aa	Known RBP	27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	CYP3A5	P20815	502 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	LRPAP1	P30533	357 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	CLCN4	P51793	760 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	WNT7B	P56706	349 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	SMAD4	Q13485	552 aa	Known RBP	27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	TMEM132D	Q14C87	1099 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	BMT2	Q1RMZ1	405 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	PUS10	Q3MIT2	529 aa	Known RBP	27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	BRSK2	Q8IWQ3	736 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	GPR65	Q8IYL9	337 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	NOC3L	Q8WTT2	800 aa	Known RBP	27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	ASB7	Q9H672	318 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	SCN1A	P35498	2009 aa		27.55	■■■□□ 2
ARHGEF3-208	ENST00000477440	XPOT	O43592	962 aa	Known RBP	27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	LDHA	P00338	332 aa	Known RBP	27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	ADH1A	P07327	375 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	FGFR3	P22607	806 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	TKT	P29401	623 aa	Known RBP	27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	POU5F1	Q01860	360 aa	Known RBP	27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	MUC3A	Q02505	3323 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	SNW1	Q13573	536 aa	Known RBP	27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	SPATA1	Q5VX52	437 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	SYCE2	Q6PIF2	218 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	PPFIBP1	Q86W92	1011 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	GLYCTK	Q8IVS8	523 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	ENGASE	Q8NFI3	743 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	PIK3R5	Q8WYR1	880 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	TSPAN18	Q96SJ8	248 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	APOL5	Q9BWW9	433 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	NUB1	Q9Y5A7	615 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	CUL9	Q8IWT3	2517 aa		27.54	■■■□□ 2
ARHGEF3-208	ENST00000477440	TRAPPC3	O43617	180 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	EXTL3	O43909	919 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	FAM160A1	Q05DH4	1040 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	PSMD5	Q16401	504 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	EFCAB13	Q8IY85	973 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	GPD1L	Q8N335	351 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	LNX1	Q8TBB1	728 aa	Predicted RBP	27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	UHRF1	Q96T88	793 aa	Predicted RBP	27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	AGPAT3	Q9NRZ7	376 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	RBAK	Q9NYW8	714 aa	Predicted RBP	27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	HSPBP1	Q9NZL4	362 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	FNIP2	Q9P278	1114 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	DERA	Q9Y315	318 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	C2CD2	Q9Y426	696 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	NCOR1	O75376	2440 aa		27.53	■■■□□ 2
ARHGEF3-208	ENST00000477440	PPEF2	O14830	753 aa		27.52	■■■□□ 2
ARHGEF3-208	ENST00000477440	IL18RAP	O95256	599 aa		27.52	■■■□□ 2
ARHGEF3-208	ENST00000477440	PSMD2	Q13200	908 aa		27.52	■■■□□ 2
ARHGEF3-208	ENST00000477440	BEST2	Q8NFU1	509 aa		27.52	■■■□□ 2
ARHGEF3-208	ENST00000477440	C2orf16	Q68DN1	1984 aa		27.51	■■■□□ 2
ARHGEF3-208	ENST00000477440	KIAA0391	O15091	583 aa	Known RBP	27.51	■■□□□ 1.99
ARHGEF3-208	ENST00000477440	CLIC2	O15247	247 aa		27.51	■■□□□ 1.99
ARHGEF3-208	ENST00000477440	MCM4	P33991	863 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms