RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 VPS39Q96JC1 886 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 CCDC42Q96M95 316 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 C9orf16Q9BUW7 83 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 NT5C3AQ9H0P0 336 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 C12orf10Q9HB07 376 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 GMIPQ9P107 970 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 DNAI1Q9UI46 699 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 MBD1Q9UIS9 605 aaPredicted RBP6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 ITIH6Q6UXX5 1313 aa6.36□□□□□ -1.39
SPTLC3-205ENST00000476791 A0A1B0GWJ7 208 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 PCP4L1A6NKN8 68 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 AP3D1O14617 1153 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 IKBKBO14920 756 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 MAGEB3O15480 346 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 CLN5O75503 358 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 OXSR1O95747 527 aaPredicted RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 BAG2O95816 211 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 POLBP06746 335 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 RARBP10826 455 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 CSF2RAP15509 400 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ACAT1P24752 427 aaKnown RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 TRIM23P36406 574 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 HERC3Q15034 1050 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 EFHC1Q5JVL4 640 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ZCCHC12Q6PEW1 402 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 NPAS3Q8IXF0 933 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 MYCT1Q8N699 235 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 DENND1AQ8TEH3 1009 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 GRAMD1AQ96CP6 724 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ZC3H10Q96K80 434 aaKnown RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 LRGUKQ96M69 825 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 GAL3ST1Q99999 423 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SLF1Q9BQI6 1058 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 OSGEPQ9NPF4 335 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 RAB6BQ9NRW1 208 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 AKAP7Q9P0M2 348 aaPredicted RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 VANGL2Q9ULK5 521 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 DOLKQ9UPQ8 538 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 AP1M2Q9Y6Q5 423 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 E2F8A0AVK6 867 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 NOTOA8MTQ0 251 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 FZD6O60353 706 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ENDOD1O94919 500 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 CKBP12277 381 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 EDN3P14138 238 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 HDCP19113 662 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SFPQP23246 707 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 TTKP33981 857 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ABCG1P45844 678 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 VBP1P61758 197 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 HNRNPUQ00839 825 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 DYNC1I2Q13409 638 aaKnown RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 VEPH1Q14D04 833 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 CWF19L2Q2TBE0 894 aaKnown RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 P3H1Q32P28 736 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SLC44A4Q53GD3 710 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 OXLD1Q5BKU9 147 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 FBXO48Q5FWF7 155 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 DCAF17Q5H9S7 520 aaPredicted RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 RTP2Q5QGT7 225 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SHEQ5VZ18 495 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 TBC1D9BQ66K14 1250 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ELMSAN1Q6PJG2 1045 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 PRICKLE2Q7Z3G6 844 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SLC51BQ86UW2 128 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 FAM124AQ86V42 546 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 VPS36Q86VN1 386 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 NUP93Q8N1F7 819 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 TTLQ8NG68 377 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 FBXO41Q8TF61 875 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 IRF7Q92985 503 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 PMEPA1Q969W9 287 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 NUSAP1Q9BXS6 441 aaKnown RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 TRIM55Q9BYV6 548 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 UBXN6Q9BZV1 441 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SENP6Q9GZR1 1112 aaPredicted RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ZNF287Q9HBT7 754 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 PDE11AQ9HCR9 933 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 KLHL11Q9NVR0 708 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 AFF4Q9UHB7 1163 aaKnown RBP6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 ANGPTL2Q9UKU9 493 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 SNX6Q9UNH7 406 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 CEP164Q9UPV0 1460 aa6.35□□□□□ -1.39
SPTLC3-205ENST00000476791 TXNL1O43396 289 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 DOK2O60496 412 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 KERAO60938 352 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 LILRB5O75023 590 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 SRGAP2O75044 1071 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ZC3H11AO75152 810 aaKnown RBP eCLIP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 GJB3O75712 270 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ATP5HO75947 161 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 ALOX5P09917 674 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 CPB1P15086 417 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 PORP16435 677 aaPredicted RBP6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 CCNA2P20248 432 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 GRIK1P39086 918 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 MAPKAPK2P49137 400 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 PPP2R2AP63151 447 aa6.34□□□□□ -1.39
SPTLC3-205ENST00000476791 TRAP1Q12931 704 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms