RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 NOSTRINQ8IVI9 506 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 ZNF461Q8TAF7 563 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 OXER1Q8TDS5 423 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
BRCA1-213ENST00000476777 ASB16Q96NS5 453 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
BRCA1-213ENST00000476777 CORO1BQ9BR76 489 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 PIAS3Q9Y6X2 628 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 A0A087WWV3 80 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 WDR27A2RRH5 827 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 CHURC1-FNTBB4DL54 471 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 I3L4J1 428 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 ZNF197O14709 1029 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 USO1O60763 962 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 LRG1P02750 347 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 PSMC3P17980 439 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 PMLP29590 882 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 GDI1P31150 447 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 FNTBP49356 437 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 CLCNKBP51801 687 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 ROR1Q01973 937 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 SRSF5Q13243 272 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 UPP1Q16831 310 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 VITQ6UXI7 678 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 MAEAQ7L5Y9 396 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 C3orf58Q8NDZ4 430 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 PIGOQ8TEQ8 1089 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 SMARCD2Q92925 531 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 ZSWIM3Q96MP5 696 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 CCDC43Q96MW1 224 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 PPP1R10Q96QC0 940 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 GJB4Q9NTQ9 266 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 RALYQ9UKM9 306 aaKnown RBP12.54□□□□□ -0.4
BRCA1-213ENST00000476777 ANGPTL2Q9UKU9 493 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 USP20Q9Y2K6 914 aa12.54□□□□□ -0.4
BRCA1-213ENST00000476777 DMXL2Q8TDJ6 3036 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 FAM205CA6NFA0 338 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 K7ESF4 209 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 ARNTLO00327 626 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 PRRG1O14668 218 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 FOXD2O60548 495 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-213ENST00000476777 PAPSS2O95340 614 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-213ENST00000476777 EDN1P05305 212 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 ATF2P15336 505 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 CCNE1P24864 410 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 ELF1P32519 619 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 CNR2P34972 360 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 VIPR2P41587 438 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 BRCC3P46736 316 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 SHC2P98077 582 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 PTGDRQ13258 359 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
BRCA1-213ENST00000476777 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 N4BP2L1Q5TBK1 243 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-213ENST00000476777 EEF1DP3Q658K8 133 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 ZBTB8OSQ8IWT0 167 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 TCEAL8Q8IYN2 117 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 BSNDQ8WZ55 320 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
BRCA1-213ENST00000476777 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-213ENST00000476777 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.4
BRCA1-213ENST00000476777 AKAP13Q12802 2813 aa12.52□□□□□ -0.4
BRCA1-213ENST00000476777 ACKR2O00590 384 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 TM4SF5O14894 197 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 MOSPD3O75425 235 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 SEC24AO95486 1093 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 PRKCBP05771 671 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.41
BRCA1-213ENST00000476777 MLLT6P55198 1093 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-213ENST00000476777 STK3Q13188 491 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 MAPK6Q16659 721 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.41
BRCA1-213ENST00000476777 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-213ENST00000476777 LONP2Q86WA8 852 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-213ENST00000476777 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 UROC1Q96N76 676 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 ADPGKQ9BRR6 497 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 C2orf40Q9H1Z8 148 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 TRPV4Q9HBA0 871 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 CYP4F11Q9HBI6 524 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 INSL5Q9Y5Q6 135 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 NCANO14594 1321 aa12.52□□□□□ -0.41
BRCA1-213ENST00000476777 ZNF263O14978 683 aa12.51□□□□□ -0.41
BRCA1-213ENST00000476777 LIMK1P53667 647 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms