RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	XYLB	O75191	536 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	FGFR3	P22607	806 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	ELF1	P32519	619 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	KRT85	P78386	507 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	SLC10A6	Q3KNW5	377 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	L1TD1	Q5T7N2	865 aa	Known RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	ZNF280D	Q6N043	979 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	PALB2	Q86YC2	1186 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	NT5DC4	Q86YG4	428 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	GLYCTK	Q8IVS8	523 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	CEP57L1	Q8IYX8	460 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	C12orf76	Q8N812	135 aa	Predicted RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	LNX1	Q8TBB1	728 aa	Predicted RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	POMGNT1	Q8WZA1	660 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	SMG7	Q92540	1137 aa	Known RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	DHX58	Q96C10	678 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	FAM212A	Q96EL1	285 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	CCDC34	Q96HJ3	373 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	PANK2	Q9BZ23	570 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	POMK	Q9H5K3	350 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	EPHX3	Q9H6B9	360 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	GOLGA2P5	Q9HBQ8	144 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	MUTYH	Q9UIF7	546 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	AGO2	Q9UKV8	859 aa	Known RBP	11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	DERA	Q9Y315	318 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	BACE2	Q9Y5Z0	518 aa		11.11	□□□□□ -0.63
CCM2-208	ENST00000476594	TTC26	A0AVF1	554 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	IL18RAP	O95256	599 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	LRPAP1	P30533	357 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	HOXA9	P31269	272 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	ASIC1	P78348	528 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	MTMR3	Q13615	1198 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	TMEM132D	Q14C87	1099 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	UVSSA	Q2YD98	709 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	PPM1L	Q5SGD2	360 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	USP37	Q86T82	979 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	ZDHHC14	Q8IZN3	488 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	LRRC15	Q8TF66	581 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	DNAJC19	Q96DA6	116 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	B3GALT6	Q96L58	329 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	ZMAT2	Q96NC0	199 aa	Known RBP	11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	FIZ1	Q96SL8	496 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	MTRR	Q9UBK8	725 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	CACNG4	Q9UBN1	327 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	FBXW11	Q9UKB1	542 aa		11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.1	□□□□□ -0.63
CCM2-208	ENST00000476594	CLUH	O75153	1309 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	FRMD3	A2A2Y4	597 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	LACTBL1	A8MY62	500 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	ZMYND10	O75800	440 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	C8A	P07357	584 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	RPL17	P18621	184 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	GART	P22102	1010 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	TKT	P29401	623 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	OR1D2	P34982	312 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	DNM1	Q05193	864 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	SOX4	Q06945	474 aa	Predicted RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	RAB33A	Q14088	237 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	ENOX2	Q16206	610 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	PTPN21	Q16825	1174 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	SEZ6	Q53EL9	994 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	DSTYK	Q6XUX3	929 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	UBALD2	Q8IYN6	164 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	EDA	Q92838	391 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	CCDC47	Q96A33	483 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	SUSD3	Q96L08	255 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	SPATA32	Q96LK8	384 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	MFSD14A	Q96MC6	490 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	PRKD2	Q9BZL6	878 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	WDR6	Q9NNW5	1121 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	KBTBD4	Q9NVX7	518 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	USP25	Q9UHP3	1055 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	CPSF3	Q9UKF6	684 aa	Known RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	MAFF	Q9ULX9	164 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	PCDHB8	Q9UN66	801 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	SORCS3	Q9UPU3	1222 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	C2CD2	Q9Y426	696 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	CDY1	Q9Y6F8	540 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	STYXL1	Q9Y6J8	313 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	UBE4B	O95155	1302 aa		11.09	□□□□□ -0.63
CCM2-208	ENST00000476594	C2CD4D	B7Z1M9	353 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	EIF3D	O15371	548 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	POLR2D	O15514	142 aa	Known RBP	11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	PPP1R37	O75864	691 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	LRG1	P02750	347 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	ADRB2	P07550	413 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	POU2F2	P09086	479 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	WEE2	P0C1S8	567 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	ODC1	P11926	461 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	COL9A1	P20849	921 aa		11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	SP100	P23497	879 aa	Predicted RBP	11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	GBP2	P32456	591 aa	Predicted RBP	11.08	□□□□□ -0.64
CCM2-208	ENST00000476594	TNFSF9	P41273	254 aa		11.08	□□□□□ -0.64

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