RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 B3GAT3O94766 335 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 DCNP07585 359 aaKnown RBP7.91□□□□□ -1.14
UBE4B-208ENST00000475795 IGFBP6P24592 240 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-208ENST00000475795 OR1D2P34982 312 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 CCT6AP40227 531 aaKnown RBP7.91□□□□□ -1.14
UBE4B-208ENST00000475795 CLCNKBP51801 687 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 STARD6P59095 220 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 HMGN5P82970 282 aaKnown RBP7.91□□□□□ -1.14
UBE4B-208ENST00000475795 UPP1Q16831 310 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 CD300LGQ6UXG3 332 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 RTL10Q7L3V2 364 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 C3orf58Q8NDZ4 430 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 ST13P5Q8NFI4 369 aaPredicted RBP7.91□□□□□ -1.14
UBE4B-208ENST00000475795 PJA1Q8NG27 643 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 FGF13Q92913 245 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 SHDQ96IW2 340 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 FOXQ1Q9C009 403 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 SEMA4AQ9H3S1 761 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 POLD4Q9HCU8 107 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 LRWD1Q9UFC0 647 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 KCNH3Q9ULD8 1083 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
UBE4B-208ENST00000475795 POLIQ9UNA4 740 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 KIAA1024Q9UPX6 916 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 TNFSF13BQ9Y275 285 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 SIT1Q9Y3P8 196 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 BACE2Q9Y5Z0 518 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 CDY1Q9Y6F8 540 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 PHLPP2Q6ZVD8 1323 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 ANK1P16157 1881 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 DCHS1Q96JQ0 3298 aa7.91□□□□□ -1.14
UBE4B-208ENST00000475795 TICRRQ7Z2Z1 1910 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 SMIM28A0A1B0GU29 152 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 CCDC169A6NNP5 214 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 K7ERI5 159 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 TRAPPC3O43617 180 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 GLULP15104 373 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 TKTP29401 623 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 GRM5P41594 1212 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 NPTX2P47972 431 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 GPC5P78333 572 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 FOXK2Q01167 660 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 SOX4Q06945 474 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 GNL2Q13823 731 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 PDIA5Q14554 519 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 PABPC1LQ4VXU2 614 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 XKR4Q5GH76 650 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 SPECC1Q5M775 1068 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 ALKAL1Q6UXT8 129 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 RSPO2Q6UXX9 243 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 ANKS3Q6ZW76 656 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 NPAS3Q8IXF0 933 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 DAW1Q8N136 415 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 CEP120Q8N960 986 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 IGSF22Q8N9C0 903 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 ITFG1Q8TB96 612 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 SNX29Q8TEQ0 813 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 RNF166Q96A37 237 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 ACO2Q99798 780 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 DDX23Q9BUQ8 820 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 CCDC94Q9BW85 323 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 MRPL4Q9BYD3 311 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 RAB34Q9BZG1 259 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 CDT1Q9H211 546 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 TMEM134Q9H6X4 195 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 GOLGA2P5Q9HBQ8 144 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 PTPRHQ9HD43 1115 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 TOPORSQ9NS56 1045 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 DDX19AQ9NUU7 478 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 HCFC1R1Q9NWW0 138 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 ARHGAP28Q9P2N2 729 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 DNMT3BQ9UBC3 853 aaKnown RBP7.9□□□□□ -1.14
UBE4B-208ENST00000475795 RABGEF1Q9UJ41 708 aa7.9□□□□□ -1.14
UBE4B-208ENST00000475795 COL4A2P08572 1712 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 CEP250Q9BV73 2442 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 KANSL1LA0AUZ9 987 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 ARHGEF37A1IGU5 675 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 E9PMD0 336 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 I3L4J1 428 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 SMAPO00193 183 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 PODXLO00592 558 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 ABLIM1O14639 778 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 HIP1RO75146 1068 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 LMNAP02545 664 aaKnown RBP7.89□□□□□ -1.15
UBE4B-208ENST00000475795 RHOP08100 348 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 SP9P0CG40 484 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 MCF2P10911 925 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 PROZP22891 400 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 U2AF2P26368 475 aaKnown RBP eCLIP7.89□□□□□ -1.159e-7■■■□□ 18.3
UBE4B-208ENST00000475795 BRCC3P46736 316 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 ID4P47928 161 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 TOB1P50616 345 aaPredicted RBP7.89□□□□□ -1.15
UBE4B-208ENST00000475795 YARSP54577 528 aaKnown RBP7.89□□□□□ -1.15
UBE4B-208ENST00000475795 PEX3P56589 373 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 OSTNP61366 133 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 PFKPQ01813 784 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 ROR1Q01973 937 aa7.89□□□□□ -1.15
UBE4B-208ENST00000475795 PRKCQQ04759 706 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms