RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 MTA2O94776 668 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 POU5F1BQ06416 359 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 EEF1DP3Q658K8 133 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 OR6J1Q8NGC5 347 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 NPLOC4Q8TAT6 608 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 PPP1R16BQ96T49 567 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 IFT122Q9HBG6 1241 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 ST7Q9NRC1 585 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 UVRAGQ9P2Y5 699 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 TNFSF13BQ9Y275 285 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 UMODL1Q5DID0 1318 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 A0A087WZ62 844 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 IQCF3P0C7M6 154 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 TFAMQ00059 246 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 TRPC3Q13507 836 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 CST9Q5W186 159 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 IQSEC1Q6DN90 963 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 FDXACB1Q9BRP7 624 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 UBXN6Q9BZV1 441 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 ACBD3Q9H3P7 528 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 CNOT8Q9UFF9 292 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 CPA4Q9UI42 421 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 MIF4GDA9UHW6 222 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 HEXIM1O94992 359 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 ASS1P00966 412 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 TMEM191BP0C7N4 346 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 HUNKP57058 714 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 MTHFD1LQ6UB35 978 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 MSL3Q8N5Y2 521 aaKnown RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 UBL4BQ8N7F7 174 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 GDAP1L1Q96MZ0 367 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 CDT1Q9H211 546 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 CARD9Q9H257 536 aa16.45■□□□□ 0.22
RPUSD3-215ENST00000475470 CCDC188H7C350 402 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 VTNP04004 478 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 GLI1P08151 1106 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 MMP3P08254 477 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 COMTP21964 271 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 GNA15P30679 374 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 MYL6P60660 151 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 GUCY2DQ02846 1103 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 PPFIA1Q13136 1202 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 DGKDQ16760 1214 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 SGSM1Q2NKQ1 1148 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 SCARA3Q6AZY7 606 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 LINC01465Q8N7H1 131 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 CEP120Q8N960 986 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 CPA5Q8WXQ8 436 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 RPS6KC1Q96S38 1066 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 PLEKHA4Q9H4M7 779 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 RPF1Q9H9Y2 349 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 TTC7AQ9ULT0 858 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 CSDE1O75534 798 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 TNNC2P02585 160 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 FGGP02679 453 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 HOXC6P09630 235 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 NSFP46459 744 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 FAM187BQ17R55 369 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 DCAF12L1Q5VU92 463 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 AENQ8WTP8 325 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 ANKRD36BP1Q96IX9 119 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 EPB41L5Q9HCM4 733 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 CNTN6Q9UQ52 1028 aa16.44■□□□□ 0.22
RPUSD3-215ENST00000475470 RAD51CO43502 376 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 ZEB2O60315 1214 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 B4GALT4O60513 344 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 TNFRSF8P28908 595 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 OAS2P29728 719 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 GRIK4Q16099 956 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 NAA35Q5VZE5 725 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 MCOLN2Q8IZK6 566 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 NLRP7Q8WX94 980 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 TRIM11Q96F44 468 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 RNPC3Q96LT9 517 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 SCLT1Q96NL6 688 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 NAP1L3Q99457 506 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 VIPAS39Q9H9C1 493 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 TNFAIP2Q03169 654 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 TRIM72Q6ZMU5 477 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 EFCAB13Q8IY85 973 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 ALG3Q92685 438 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 CYFIP2Q96F07 1278 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 GDF3Q9NR23 364 aa16.43■□□□□ 0.22
RPUSD3-215ENST00000475470 GPR25O00155 361 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 THAP12O43422 761 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 SPOPO43791 374 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 IL18RAPO95256 599 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 CXCL8P10145 99 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 MYBL1P10243 752 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms