RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 MARCH6O60337 910 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 CDC45O75419 566 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 EDN1P05305 212 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 GDI1P31150 447 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 CLCNKBP51801 687 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 PTGDRQ13258 359 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 UPP1Q16831 310 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 EARS2Q5JPH6 523 aaKnown RBP19.79■□□□□ 0.76
RNF220-212ENST00000475378 N4BP2L1Q5TBK1 243 aaPredicted RBP19.79■□□□□ 0.76
RNF220-212ENST00000475378 PIK3AP1Q6ZUJ8 805 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 SPEM1Q8N4L4 309 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 OXER1Q8TDS5 423 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 ZSWIM3Q96MP5 696 aa19.79■□□□□ 0.76
RNF220-212ENST00000475378 NAP1L4Q99733 375 aaKnown RBP19.79■□□□□ 0.76
RNF220-212ENST00000475378 KIF26AQ9ULI4 1882 aaPredicted RBP19.79■□□□□ 0.76
RNF220-212ENST00000475378 EML5Q05BV3 1969 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 I3L4J1 428 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 ZNF197O14709 1029 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 CPLX1O14810 134 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 FOXD2O60548 495 aaPredicted RBP19.78■□□□□ 0.76
RNF220-212ENST00000475378 USO1O60763 962 aaKnown RBP19.78■□□□□ 0.76
RNF220-212ENST00000475378 MOSPD3O75425 235 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 ATF2P15336 505 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 PSMA5P28066 241 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 BRCC3P46736 316 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 LIMK1P53667 647 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 IRX6P78412 446 aaPredicted RBP19.78■□□□□ 0.76
RNF220-212ENST00000475378 WDR44Q5JSH3 913 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 LONP2Q86WA8 852 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 TCEAL8Q8IYN2 117 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 PIGOQ8TEQ8 1089 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 DEPDC1BQ8WUY9 529 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 SMARCD2Q92925 531 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 USP20Q9Y2K6 914 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 ZZEF1O43149 2961 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 CITO14578 2027 aa19.78■□□□□ 0.76
RNF220-212ENST00000475378 A0A087WWV3 80 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 BAG4O95429 457 aaKnown RBP19.77■□□□□ 0.76
RNF220-212ENST00000475378 SEC24AO95486 1093 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 CCNE1P24864 410 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 MLLT6P55198 1093 aaPredicted RBP19.77■□□□□ 0.76
RNF220-212ENST00000475378 GLRA4Q5JXX5 417 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 EEF1DP3Q658K8 133 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 ZBTB8OSQ8IWT0 167 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 FAM160A2Q8N612 972 aaPredicted RBP19.77■□□□□ 0.76
RNF220-212ENST00000475378 ZNF274Q96GC6 653 aaPredicted RBP19.77■□□□□ 0.76
RNF220-212ENST00000475378 CCDC113Q9H0I3 377 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 TRPV4Q9HBA0 871 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 GOLGA2P5Q9HBQ8 144 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 GDAQ9Y2T3 454 aa19.77■□□□□ 0.76
RNF220-212ENST00000475378 FAM205CA6NFA0 338 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 PRRG1O14668 218 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
RNF220-212ENST00000475378 ELF1P32519 619 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 VIPR2P41587 438 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 PRPF4BQ13523 1007 aaKnown RBP19.76■□□□□ 0.75
RNF220-212ENST00000475378 IL31Q6EBC2 164 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 PDZD4Q76G19 769 aaPredicted RBP19.76■□□□□ 0.75
RNF220-212ENST00000475378 MAEAQ7L5Y9 396 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 BSNDQ8WZ55 320 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 CCDC43Q96MW1 224 aaKnown RBP19.76■□□□□ 0.75
RNF220-212ENST00000475378 UROC1Q96N76 676 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 ADPGKQ9BRR6 497 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 GJB4Q9NTQ9 266 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 RBM12Q9NTZ6 932 aaKnown RBP19.76■□□□□ 0.75
RNF220-212ENST00000475378 C2orf42Q9NWW7 574 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 PCDHA12Q9UN75 941 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 INSL5Q9Y5Q6 135 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 SPEGQ15772 3267 aa19.76■□□□□ 0.75
RNF220-212ENST00000475378 NUP210Q8TEM1 1887 aaPredicted RBP19.75■□□□□ 0.75
RNF220-212ENST00000475378 ACKR2O00590 384 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 ZNF263O14978 683 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 TRAPPC3O43617 180 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 PRKCBP05771 671 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 KCNA4P22459 653 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 RUFY3Q7L099 469 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 MFSD6LQ8IWD5 586 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 HS6ST3Q8IZP7 471 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 MSANTD3Q96H12 275 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 LARP6Q9BRS8 491 aaKnown RBP19.75■□□□□ 0.75
RNF220-212ENST00000475378 C2orf40Q9H1Z8 148 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 CYP4F11Q9HBI6 524 aa19.75■□□□□ 0.75
RNF220-212ENST00000475378 HOXA6P31267 233 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 HOXC13P31276 330 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 EPHA5P54756 1037 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 SOX4Q06945 474 aaPredicted RBP19.74■□□□□ 0.75
RNF220-212ENST00000475378 MRPL58Q14197 206 aaKnown RBP19.74■□□□□ 0.75
RNF220-212ENST00000475378 LRRC32Q14392 662 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 MAPK6Q16659 721 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 DCAF4L1Q3SXM0 396 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 CYP4A22Q5TCH4 519 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 HEATR6Q6AI08 1181 aaKnown RBP19.74■□□□□ 0.75
RNF220-212ENST00000475378 Q6ZS52 159 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 MCPH1Q8NEM0 835 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 ZSCAN18Q8TBC5 510 aaPredicted RBP19.74■□□□□ 0.75
RNF220-212ENST00000475378 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
RNF220-212ENST00000475378 ZSWIM6Q9HCJ5 1215 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 RXFP3Q9NSD7 469 aa19.74■□□□□ 0.75
RNF220-212ENST00000475378 ATG2BQ96BY7 2078 aa19.73■□□□□ 0.75
RNF220-212ENST00000475378 HEPACAM2A8MVW5 462 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms